Gene Vapar_2755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2755 
Symbol 
ID7970968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2905820 
End bp2906335 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content72% 
IMG OID644793342 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002944643 
Protein GI239815733 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCCC GCCTGCTGGC CGACCAGATC CCGAGCCTGC GCCGCTATGC GCGCGCGCTC 
ACGGGCAACG TCTGGGCGGC CGACGACCTG GTGCAGGACA CGCTCGAGCG GGCCTGCAGC
AAGTGGCGGC TCTGGGTGGT GGGCAGCGAC CTGCGCGCCT GGTTGTTCAC GGTCATGCAC
AACATCTTTG CGAGCCAGCT GCGGCGCACG CCGCCGCCGC ACAGCGTGGT GCCGCTGGAG
GACGCGGTGC AGGAGCTGCA CGGCGCCGCC GATCCGGGCC GCGACCCCGG CATGGGCCTG
GACCTGCAGC GCTGCCTGAT GCAGCTGCCC GAAGAGCAGC GCGCCGTGCT GCTGCTCGTC
ACGCTCGAAG ACCTTTCCTA TGCCGAGGTG GCCAAGGTGC TCGGCATCCC CGCCGGCACC
GTGATGTCGC GCCTGTCGCG CGCCCGCGTC CGGCTGCAGG AGCTGATGGA CGGCGCCGCT
GCGCCGCATC GCCCCGGACT GCGCCGCCTC AAGTGA
 
Protein sequence
MDARLLADQI PSLRRYARAL TGNVWAADDL VQDTLERACS KWRLWVVGSD LRAWLFTVMH 
NIFASQLRRT PPPHSVVPLE DAVQELHGAA DPGRDPGMGL DLQRCLMQLP EEQRAVLLLV
TLEDLSYAEV AKVLGIPAGT VMSRLSRARV RLQELMDGAA APHRPGLRRL K