| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2702 |
|---|
| Symbol | |
|---|
| ID | 7972302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 2845954 |
|---|
| End bp | 2846757 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644793290 |
|---|
| Product | IstB domain protein ATP-binding protein |
|---|
| Protein accession | YP_002944592 |
|---|
| Protein GI | 239815682 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1484] DNA replication protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.674415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGA TTGCATCCGC GCGCACCGCG GCCGATGCAG CGCGCCTGCC CCTCATGCTG
GCAGAACTGA GGCTTCCAAC GATGAAGCGG CTATGGGCCG ATCTGGCTGA GCAGTCCAAC
CGCGAAGGCT GGCCGGCAGA ACGCTTCCTC GGCGTACTGC TCGAGCAGGA GGTCAACGAA
CGCGAGACGC GTCGGCTTGC GCGCGCTCGC ATCGATAGCC AACTGCCACC GGACAAGAGC
TTGGCCAGCT TCGACTTCGA CGCAGTTCCG GCGGTCTCCA AGGCTCACGT CACCGCCTTG
GCCGAGGCCG ATGGCTGGCT CGCACAAGGG CACAACTTGC TCGCCTTCGG GCCGCCGGGC
GTGGGCAAGA CCCATCTCAT TGCCGGCATC GGCCATGCTC TCATCGATCA CGGCTACAAG
GTGCTCTTCG TGCGCACGAG CGAATTGGTG CAGCGCCTGC AGGCGGCGCG CCGGGACCTG
CGCTTGCCAA ATGAACTCGC CAAGCTCGAT CGCTTCGACC TCATCATCCT GGACGATCTG
AGCTATGCGC GGCGGGACCA GGCGGAGACC TCCGTACTGT TCGAGCTCAT CGCCGAGCGC
TACGAGAGAA AGAGCATCGC CATCACGGCC AACGCACCCT TCTCGGCATG GGACGAGGTG
TTCCCTGACA AGGCCATGAC GATCGCCGCG GTCGACCGCT TGGTCCATCA CGCCACGATC
CTGGAGATGA ACGTGGACAG CTACCGCCGC CGCGCTGCGT TGCCGGCTCG CCGGCAACGC
AGCGCAACGA CAACTACTCA ATGA
|
|---|
| Protein sequence | MNTIASARTA ADAARLPLML AELRLPTMKR LWADLAEQSN REGWPAERFL GVLLEQEVNE
RETRRLARAR IDSQLPPDKS LASFDFDAVP AVSKAHVTAL AEADGWLAQG HNLLAFGPPG
VGKTHLIAGI GHALIDHGYK VLFVRTSELV QRLQAARRDL RLPNELAKLD RFDLIILDDL
SYARRDQAET SVLFELIAER YERKSIAITA NAPFSAWDEV FPDKAMTIAA VDRLVHHATI
LEMNVDSYRR RAALPARRQR SATTTTQ
|
|---|
| |