| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2683 |
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| Symbol | |
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| ID | 7972282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2826658 |
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| End bp | 2827383 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644793271 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944574 |
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| Protein GI | 239815664 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0166157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGAC ACAGCAAATG GGCGAACATT CAGCACCGCA AGGGCCGCCA GGACGAGAAG
CGCGGCAAGC TCTGGACCCG CGCCATCCGT GAAATCACCG TGGCTGCCCG CGCCGGCGGG
GGCGACCTCA GCGCCAACCC GCGGCTGCGG CTGGCGGTCG AGAAGGCCAA GGCGGTCAAC
CTGCCGATCG ACACCGTCAA GCGCAACATC GACAAGGCCA CCGGCAACCT CGAAGGCGTC
AATTACGAAG AAATTCGTTA CGAAGGGTAC GGCATCGGCG GCGCGGCGAT CATCGTCGAC
ACCATGACCG ACAACCGCGT GCGCACCGTG GCGGAAGTAC GCCACGCCTT CTCCAAGCAC
GGCGGCAACA TGGGCACCGA AGGCTCGGTG GCCTTCCAGT TCAAGCACTG CGGCCAGATC
ATCTTCGCCC CTGGCACCAA TGAAGACAAG GTGATGGAAG CCGCGCTCGA AGCCGGCGCC
GAGGATGTGG TCACCGATGA CGACGGCGCC ATCGAGGTGA TCACCGCCGT CGCCGACTTC
GAAGCCGTCA AGAATGCGCT CGAAGCCGCC GGCCTCAAGC CCGAGGTGGC CGAGGTCACC
ATGCGCGCCG AAAACACGAT CGAACTGACC GGCGAGGACG CAGCCAGGAT GCAGAAGCTG
CTCGATGTGC TCGAAGACCT GGACGACGTC CAGGAGGTCT ATCACAACGC CGCGCTCTCC
GAATGA
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| Protein sequence | MAGHSKWANI QHRKGRQDEK RGKLWTRAIR EITVAARAGG GDLSANPRLR LAVEKAKAVN
LPIDTVKRNI DKATGNLEGV NYEEIRYEGY GIGGAAIIVD TMTDNRVRTV AEVRHAFSKH
GGNMGTEGSV AFQFKHCGQI IFAPGTNEDK VMEAALEAGA EDVVTDDDGA IEVITAVADF
EAVKNALEAA GLKPEVAEVT MRAENTIELT GEDAARMQKL LDVLEDLDDV QEVYHNAALS
E
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