| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2680 |
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| Symbol | |
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| ID | 7972279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2823883 |
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| End bp | 2824686 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793268 |
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| Product | phospholipid/glycerol acyltransferase |
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| Protein accession | YP_002944571 |
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| Protein GI | 239815661 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00706693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATGA CCCGCGTGCT GCGCATTCTC ACGGCCATTC CGCTTGCGTT GATGCTCTAC
GCGCTGCTGC TGTTCCTGGG GCTGATTTCG CTGGCCTGGA ACCTCGTCGC GATGCTGCTC
TACCCGGTGA TGCCCGAGGC GCCCGCGCGC ACGCTGGGCC GCCTGACCAT CGCCTTCGCC
TACCGCATGT TCTGGGGCCT GGCCTCGGTG ACCGGGATGA TGCGAATCGA CGCCAGCTGC
CTGGACCCGA TGCGCAACGA GCCGGGCGTG ATCTTCGTGG CCAACCACCC CACCATGCTC
GACGCGCTGC TGCTGGTGGC GCGGCTGCCG CGCAGCGCCT GCATCATGAA GGCCGACCTG
CTGCGCAACA TCTTCCTGGG CGCGGGCGCA CGGCTGGCGC GCTACATCAG CAACGAGTCG
GCCCGCACCA TGGTGCGCCT GGCGGTGGCC GACCTGCGCA ATGGCGGCCA GCTGGTGATC
TTTCCGGAAG GCACGCGCAC CGTGACGCCG CCGCTCAATC CCTTCGGCCC CGGCGTGACG
CTGATCGCCA AGCTCGCGCA GGCCCCGATC CAGACCGTGT TCATCGAGAC CGACTCGCCC
TACCTCAGCA AGGGCTGGCC GCTGTGGCGC GTGCCGCCGC TGCCCATCGT CTTCAGGCTC
CGGCTGGGCC AGCGCTTCGC GCCCATGCAG GACAGCCACG TGCTGCAATC GGAGCTCGAA
CAATACTTTC GCCAACACAT GGAACAGCGC GCAACCGACG CGTCCCCCGC ATGCCAGACG
CCTCGCGCAC ACACCTTGTC CTGA
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| Protein sequence | MSMTRVLRIL TAIPLALMLY ALLLFLGLIS LAWNLVAMLL YPVMPEAPAR TLGRLTIAFA
YRMFWGLASV TGMMRIDASC LDPMRNEPGV IFVANHPTML DALLLVARLP RSACIMKADL
LRNIFLGAGA RLARYISNES ARTMVRLAVA DLRNGGQLVI FPEGTRTVTP PLNPFGPGVT
LIAKLAQAPI QTVFIETDSP YLSKGWPLWR VPPLPIVFRL RLGQRFAPMQ DSHVLQSELE
QYFRQHMEQR ATDASPACQT PRAHTLS
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