| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2668 |
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| Symbol | |
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| ID | 7972430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2811564 |
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| End bp | 2813078 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793256 |
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| Product | protein of unknown function DUF853 NPT hydrolase putative |
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| Protein accession | YP_002944559 |
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| Protein GI | 239815649 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0433] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.881432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACC CCCTTCTGAT CGCGCGCCAC GACACCATCG AGTGCACCCT GCTGCCCAGC
CTGGCCAACC GCCACGGCCT CATCACCGGC GCCACCGGCA CCGGCAAGAC GGTCACGCTG
CAGACCATGG CCGAAAAGCT CTCGGGCATC GGCGTTCCCG TGTTCATGGC CGACGTCAAG
GGCGACCTGA CCGGCATGAG CCAGAAAGGC AGCATCGGCG AAAAAATGGC GGCCACGCTG
AAGGAACGGG GCATCGATCT GCCCGAATCG CAGGCCTGCC CCGTCACCCT GTGGGACGTG
TTCGGCGAAC AGGGCCACCC GGTGCGCGCC ACCGTCTCCG ACATGGGGCC CCTGCTGCTG
GGCCGCATGC TCGACGTGAA CGAAACGCAG GCCGGCGTGC TGAACCTGGT GTTCAAGATC
GCCGACGACA ACGGCCTGCT GCTGCTCGAC CTGAAGGACC TGCGCGCCAT GCTGCAGTAC
GTGGGCGAGA ACGCGAGCCA GTTCACCACC GAGTACGGCA ACATCAGCGC CGCCAGCGTG
GGCGCCATCC AGCGCGGCCT GCTGCAGATC GAGACCCAGG GCGGCGACAA GTTCTTCGGC
GAGCCGATGC TCAACATCGC CGACTTCATG CAGACGGTGG GCGGCAAGGG CGTGGTCAAC
ATCCTGGCGG CCGACAAGCT CATGAATTCG CCGCGGCTCT ACGCCACCTT TCTGCTCTGG
ATGCTGTCCG AACTGTTCGA ACAGCTGCCC GAGATCGGCG ACCCCGAGCA GCCCAAGCTC
GCCTTCTTCT TCGACGAGGC CCACCTGCTC TTCAACGAGG CGCCCAAGGC GCTGGTCGAG
CGCATCGAGC TCGTGGTGCG GCTGGTGCGC TCCAAGGGCG TGGGGGTTTA TTTCGTGACG
CAGAACCCGC TGGACATTCC GGATTCGGTG CTGGCCCAGC TGGGCAACCG CGTGCAGCAT
GCGCTGCGCG CCTTCACCCC GCGCGACCAG AAGGCCGTCA AGGCCACGGC CACCACCATG
CGCCAGAAGC CGGGACTGGA CATCGAAACC GCGATCACCG AGCTCGCGGT GGGCGAGGCG
CTGGTGAGTT TTCTCGATGC CAAGGGCCGC CCGAGCGTGA CCGAGCGCGT GTTCGTGGTG
CCACCCGGCA GCCAGATCGG CCCCATCACG GCCGCGCAGC GCCAGGCGGT CATTGCCAAT
TCGCTCGTCG CTGGCGTGTA CGAGAAGACC GTGGACCGCG AATCGGCCTA CGAAAAACTC
AAGGGCCGGG CCGAAACCGC GCCCGATGCA CCGCAGCCCA AGACGGCGGG CGCCGGCAAG
GGTGCGGCCG AAGCGTCCGA AGGCAGCAGC ATGCTGAACG ACCTGCTCTT CGGCAGCACG
GGCCCGCGCG GCGGCAAGCG CGACGGCCTC GTGCAGACCA TGGCCAAGTC GGCGGTGCGG
ACCATGGGCA CCTCGGTCGG CAAGGAAATC CTGCGCGGCG TGCTGGGCGG CATCTTCGGC
GCCAAGAAGC GCTGA
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| Protein sequence | MADPLLIARH DTIECTLLPS LANRHGLITG ATGTGKTVTL QTMAEKLSGI GVPVFMADVK
GDLTGMSQKG SIGEKMAATL KERGIDLPES QACPVTLWDV FGEQGHPVRA TVSDMGPLLL
GRMLDVNETQ AGVLNLVFKI ADDNGLLLLD LKDLRAMLQY VGENASQFTT EYGNISAASV
GAIQRGLLQI ETQGGDKFFG EPMLNIADFM QTVGGKGVVN ILAADKLMNS PRLYATFLLW
MLSELFEQLP EIGDPEQPKL AFFFDEAHLL FNEAPKALVE RIELVVRLVR SKGVGVYFVT
QNPLDIPDSV LAQLGNRVQH ALRAFTPRDQ KAVKATATTM RQKPGLDIET AITELAVGEA
LVSFLDAKGR PSVTERVFVV PPGSQIGPIT AAQRQAVIAN SLVAGVYEKT VDRESAYEKL
KGRAETAPDA PQPKTAGAGK GAAEASEGSS MLNDLLFGST GPRGGKRDGL VQTMAKSAVR
TMGTSVGKEI LRGVLGGIFG AKKR
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