| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2659 |
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| Symbol | |
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| ID | 7972421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2803665 |
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| End bp | 2804609 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793247 |
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| Product | Adenosylhomocysteine nucleosidase |
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| Protein accession | YP_002944550 |
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| Protein GI | 239815640 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00656032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATGC GCTGGCGCTC TCTTCTCGCG GCCGGCGTGC TGGCCTTCGG CCTCGCGGGC
TGTGCCGGTG TCTACAAGAG CCCGGGCGCC GCCGACGGCA GCGTGCGGCT GGACGACACG
CCGCGCATCG CGGTGGTCTC GGCCTTCCAG CCCGAGCTCA CGCTGCTGCT GAACCGGCTC
CAGCAGCCGG CCAAGCACAG CGTCAACGGC GTCGAGTTCA CCACCGGCAC GCTCGAAGGC
AAGCCGGTGG TGCTGTTTCT CTCCGGCATC AGCATGACCA ACGCGACGAT GAACACGCAG
CTGGTGCTCG ACCGCTTTCG CGTCACCCAC ATCGTGTTCA GCGGCATCGC GGGCGGCGTG
AATCCGCAGC TGCACGTGGG CGACGTCACG GTGCCCGCGC AATGGGGCCA GTACCTCGAA
GTGCTGATGG CGCGCGAAAC CGCGCCGGGC AAGTTCACCG CGCCGCCCTT CATCACCGAT
GCCACGCTGC CCAACTTCGG CATGATGCAT CCGCGCCCGG TGGAAGTGCG CTCCGCGGCA
CATCCGCAGA TCGTGCGCAA GTTCTGGTTC GAGGCGGACC CGAAGATGCT CGAGGTGGCG
CGCAGCATCC GCAATGTCGA CCTGGCGAAC TGCAGCGCCG GCAAGTGCCT GGCGCGCAAG
CCCCATCTGG TCGTCGGCGG CAACGGCGTC TCGGGCCAGG CCTTCATGGA CAACAAGGCC
CTGCGCGAAT ACACCTTCAA GACCTTCCAG GCCAACGTGC TCGACATGGA AACGGCGGCC
GTGGGCATGG TGGCCTACAG CAACGGCGTG CCCTACATCG CCTTCCGCTC CCTCAGCGAC
CTGGCGGGCG GCGGCGAAGG CGAGAACGAG ATGGGCACCT TCATGGGCAT TGCGGCCGAC
AACTCGGCCA AGGTGATGCT GGCGTTCCTG GCTGCATGGA AATGA
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| Protein sequence | MTMRWRSLLA AGVLAFGLAG CAGVYKSPGA ADGSVRLDDT PRIAVVSAFQ PELTLLLNRL
QQPAKHSVNG VEFTTGTLEG KPVVLFLSGI SMTNATMNTQ LVLDRFRVTH IVFSGIAGGV
NPQLHVGDVT VPAQWGQYLE VLMARETAPG KFTAPPFITD ATLPNFGMMH PRPVEVRSAA
HPQIVRKFWF EADPKMLEVA RSIRNVDLAN CSAGKCLARK PHLVVGGNGV SGQAFMDNKA
LREYTFKTFQ ANVLDMETAA VGMVAYSNGV PYIAFRSLSD LAGGGEGENE MGTFMGIAAD
NSAKVMLAFL AAWK
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