| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2628 |
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| Symbol | |
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| ID | 7972390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2772821 |
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| End bp | 2774092 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793216 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002944519 |
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| Protein GI | 239815609 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.122301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTCG AATACTCGGC AAAAACCAAG GAGCTCCAGA AGCGCGTGAG CGCATTCATG
GATGCGCACA TCTATCCGGC CGAAGCCGAG TATTCCGCCG AGCTGGCCGC CAACACGGCC
GCAGGCAAGC GCTGGACCGC GCTCAAGACC GTCGAGAAGC TCAAGGAAAA GGCCAAGGCC
CAGGGCCTGT GGAACCTGTT CCTGCCGGTC GACAGCGCGG CCGCCTCGGG CTACGAAGGC
GCCGGCCTCA CCAACCAGGA ATACGCGCCG CTGGCCGAGA TCATGGGCCG CGTGCCATGG
GCCTCGGAAG CCTTCAACTG CTCGGCGCCG GACACGGGCA ACATGGAGAC CATTGCCCGC
TACGGCTCCG AAGCCATCAA GGCGCGCTGG CTCAAGCCGC TGCTCGAAGG CCAGATCCGC
TCGGCCTTCG CCATGACCGA ACCCGATGTC GCCTCCAGCG ACGCGACCAA CATCTCGACC
CGCATCGAGC GCCAGGGCGA CGAGTACGTC ATCAACGGCC GCAAGTGGTG GATCTCGGGC
GCTGCCGATC CGCGCTGCGC CGTCTTCATC ACCATGGGCA AGAGCGACCC CGACGCGCCG
CGGCATTCGC AGCAGAGCAT GATCATCGTG CCGGCCGACG CCAAGGGCAT CCGCATCGTG
CGGCCGCTCA ACGTGATGGG CTACGACGAC GCGCCGCACG GCCACGTCGA GATGTACTTC
GAGAACGTGC GCGTGCCGGC CGACAACATG CTGCTCGGCG AAGGCCGCGG CTTCGAAATT
GCCCAGGGCC GCCTCGGCCC CGGACGCATC CACCACTGCA TGCGCCTGAT CGGCCTGGCC
GAGCGCGCGC TCGAGCTGAT GTGCAAGCGC GCCTCCTCGC GCGTGGCCTT CGGCAAGACC
GTCGCCTCGC AGACCGTCAC GCAGGAGCGC ATCGCCGAAG CGCGCTGCAA GATCGACATG
GCGCGCCTGC TCACGCTCAA GGCCGCATGG CTGATGGACG TGGCCGGCAA CAAGGTCGCC
AAGAACGAGA TCGCGATGAT CAAGGTGGTC GCGCCCAGCA TGGCCTGCCA GGTGATCGAC
TGGGCCATGC AGGTCCACGG CGGCGGCGGC ATGTCCGATG ACTTCCCGCT CGCCTACGCC
TATGCCGGCG CGCGCACGCT GCGCTTCGCG GACGGCCCGG ACGAAGTGCA CCGCAATGCG
ATCGCCAAGT GGGAGCTGGG CAAGTACGCG CCGAACAAGG GCGATGCCGA CATGCCCGTC
ACGCGCTTCT GA
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| Protein sequence | MDFEYSAKTK ELQKRVSAFM DAHIYPAEAE YSAELAANTA AGKRWTALKT VEKLKEKAKA
QGLWNLFLPV DSAAASGYEG AGLTNQEYAP LAEIMGRVPW ASEAFNCSAP DTGNMETIAR
YGSEAIKARW LKPLLEGQIR SAFAMTEPDV ASSDATNIST RIERQGDEYV INGRKWWISG
AADPRCAVFI TMGKSDPDAP RHSQQSMIIV PADAKGIRIV RPLNVMGYDD APHGHVEMYF
ENVRVPADNM LLGEGRGFEI AQGRLGPGRI HHCMRLIGLA ERALELMCKR ASSRVAFGKT
VASQTVTQER IAEARCKIDM ARLLTLKAAW LMDVAGNKVA KNEIAMIKVV APSMACQVID
WAMQVHGGGG MSDDFPLAYA YAGARTLRFA DGPDEVHRNA IAKWELGKYA PNKGDADMPV
TRF
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