Gene Vapar_2619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2619 
Symbol 
ID7972381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp2765010 
End bp2765486 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content66% 
IMG OID644793207 
Producttranscription elongation factor GreA 
Protein accessionYP_002944510 
Protein GI239815600 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.243499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACCA TTCCAATTAC CAAGCGCGGT GCCGAGAAGC TGCGCGCCGA GCTGCATCAG 
CTCAAGACCG TGGACCGCCC CTGGGTCATC AATGCCATCT CCGAAGCCCG CGCGCAGGGC 
GACCTGAGCG AGAACGCCGA ATACGAAGTC GCCAAGGACC GCCAGGGCTT CATCGAGGGC 
CGCATCCAGG AAGTCGAGGG CAAGCTTTCG GCCGCCCAGA TCATCGACCC GGCCGAGCTC 
GACGCCGGCG GCAAGGTGGT GTTCGGCTCC ACGGTGGAAC TCGAGGAAGA AGAATCGGGC 
GAGGCCGTCA AGTACCAGAT CGTCGGCGAG GACGAGGCCG ACCTGAAGCT GGGCCTGATC 
AACATCTCCA GCCCGATCGC GCGCGCGCTC ATCGGCAAGG AAGAAGGCGA CACCGCCGAG 
GTGCAGGCGC CCGGCGGCCT CAAGCGCTAC GAGATCGTGG CGGTGCGCTA CATCTGA
 
Protein sequence
MATIPITKRG AEKLRAELHQ LKTVDRPWVI NAISEARAQG DLSENAEYEV AKDRQGFIEG 
RIQEVEGKLS AAQIIDPAEL DAGGKVVFGS TVELEEEESG EAVKYQIVGE DEADLKLGLI 
NISSPIARAL IGKEEGDTAE VQAPGGLKRY EIVAVRYI