| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2589 |
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| Symbol | |
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| ID | 7970067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2731920 |
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| End bp | 2732516 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644793177 |
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| Product | polyhydroxyalkonate synthesis repressor, PhaR |
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| Protein accession | YP_002944481 |
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| Protein GI | 239815571 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.696628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGCAAA ACCGCTACCT AGAATCATCG GATGACATGG GCATCCATGT GAAGGAGTCC
GCAGTGCAGA GCAAGAAGTC CGGGGTCAAG CCGGTGCAAC GTGTAATCAA GAAGTACCCC
AACCGAAGGC TCTACGACAC CGAGACATCC ACGTACATCA CGCTCACCGA GGTGAAGCAG
CTGGTCATAC AGAATGCCCA GTTCGTGGTG CGCGATGCCA AGACCGGCGA CGACCTCACG
CGCAGCATCC TGCTGCAGAT CATCCTCGAG GAAGAGGCGG GCGGTGCGCC CATGTTCACC
GAGCAGGTGC TGGCCAACAT CATCCGCTTC TACGGTCAGG CGATGCAGGG CTACATGGGT
CCCTATCTCG AGAAGAACAT CCAGGCCATG ACCGAGGTAC AGGCCCAGCT CACCGAAAAG
GCCGAAGGCC TCACGCCCGA GATGTGGTCG CGCTTCATGA CCATGCAGTC GCCCATGCTC
CAGGGACTCA TGGGCAACTA CGTCGAGCAG TCCAAGAACG TGTTCCTGCA GATGCAGGAG
CAGATGCAGA AAAATACCGA GCAGGTCCTG GGCGCATTCG GCATCAAACG CCCCTGA
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| Protein sequence | MQQNRYLESS DDMGIHVKES AVQSKKSGVK PVQRVIKKYP NRRLYDTETS TYITLTEVKQ
LVIQNAQFVV RDAKTGDDLT RSILLQIILE EEAGGAPMFT EQVLANIIRF YGQAMQGYMG
PYLEKNIQAM TEVQAQLTEK AEGLTPEMWS RFMTMQSPML QGLMGNYVEQ SKNVFLQMQE
QMQKNTEQVL GAFGIKRP
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