Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2544 |
Symbol | |
ID | 7970021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2686566 |
End bp | 2687387 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644793131 |
Product | protein of unknown function DUF81 |
Protein accession | YP_002944436 |
Protein GI | 239815526 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.367735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTTCCC TGCTCGACCC CCTCCTGATC GCCGAATTGG CCGCGCTCGG CCTGGGCACC GGTTTCCTGG CGGGCCTGCT GGGCATCGGC GGCGGGATGC TCATGGTGCC GTTCATCACG ATCATCATGG GGCACCGCGG GGTGGCCTCC GATCTTGCCG TGAAGATGGC GATCGCCACC TCGATGGCCA CGATCATCTT CACCTCGGTG TCCAGCGTGC GCGCCCATCA CAAGCGCGGC GCGGTGCGCT GGGACATCGT GCGGCGCCTG GCGCCCGGCA TCGTCATCGG CAGCCTGCTG GGCAGCCTGG GCGTGTTCGC GCTGCTCAAG GGCACGGTGC TGGCCATCGT CTTTGCGCTG TTCGTGGGCT TCTCGGCCAC GCAGATGTTC CTCGACCGCA AGCCCAAGCC CACGCGCCAG ATGCCGGGCA CCGCGGGGCA GCTGTCGGCG GGCGGCGCCA TCGGCTTCAT CTCGGGCCTG GTCGGCGCGG GCGGCGGCTT TGTCAGCGTG CCGTTCATGA CCTGGTGCAA CATCTCCATC CACAACGCCG TGGCCACCAG CGCCGCGCTC GGCTTTCCGA TTGCGGTGGC CAACGTGCTG GGCTACGTGG TGAGCGGGCA GTCGGTGCAG GGCCTTCCGG CCGGCTCGTT CGGCTACATC TGGCTGCCCG CGCTGGTGGT CATTGCGCTG TGCAGCGTGC TCACTGCGCC GCTCGGCGCG AAGGCGGCGC ACAACCTGCC GGTGAAGAAG CTCAAGCGCG TATTTGCGAG CATCCTGTAC CTGCTGGCGG CCTACATGCT CTGGAAGGGC CTGCAGGGCT GA
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Protein sequence | MTSLLDPLLI AELAALGLGT GFLAGLLGIG GGMLMVPFIT IIMGHRGVAS DLAVKMAIAT SMATIIFTSV SSVRAHHKRG AVRWDIVRRL APGIVIGSLL GSLGVFALLK GTVLAIVFAL FVGFSATQMF LDRKPKPTRQ MPGTAGQLSA GGAIGFISGL VGAGGGFVSV PFMTWCNISI HNAVATSAAL GFPIAVANVL GYVVSGQSVQ GLPAGSFGYI WLPALVVIAL CSVLTAPLGA KAAHNLPVKK LKRVFASILY LLAAYMLWKG LQG
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