Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2522 |
Symbol | fumC |
ID | 7969999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2663333 |
End bp | 2664730 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644793109 |
Product | fumarate hydratase |
Protein accession | YP_002944414 |
Protein GI | 239815504 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACTT CCCCCAAGAC CCGTGCCGAG CGCGATACCT TCGGACCGAT CGACGTGCCG GCCGACAAGC TGTGGGGTGC GCAGACGCAG CGCTCGCTGC AGAACTTCGA CATCTCCGGC GAGCAGCAGC CGCGCGAGAT CATCAAGGCG CTGGCGCAGG TCAAGCGCGC CTCGGCCGTG GTCAACCACG CGCTGGGCCT GCAGGACGAG AAAAAAACCA AGGCCATCGT GGCCGCGGCC GACGAGGTCA TTGCCGGCAA GCATCCGGGC GAGTTTCCGC TGGTGGTCTG GCAGACCGGC TCGGGCACGC AGACCAACAT GAACGTCAAC GAGGTGCTGG CCAACCGCGC GAGCGAACTG CTCGGCGGCG AGCGCGGGGA AGGGCGCCTC GTGCACCCGA ACGACGACGT GAACCGCAGC CAGTCGAGCA ACGACGTGTT CCCCACCGCC ATGCACGTGG CGGCCGTCGA GGCCATCACG CACAAGCTGC TGCCGGCCAT CGCCAGGCTG CGCAGCACGC TCGAGCAGAA GTCGAAGGAC TTTGCCGACA TCGTGAAGAT CGGCCGCACC CACCTGCAGG ACGCCACGCC GCTCACGCTG GGCCAGGAGT TCTCGGGCTA TGTGGCGCAG CTCGCGCATG GCGAGGCGCA TGTGCGCGCC GCGCTGCCGC ACCTGTGCGA ACTGGCGCTG GGCGGCACGG CCGTCGGCAC CGGGCTCAAT GCGCCCAAGG GCTATGCCGA GCAGGTGGCG GCCGAGCTGG CCAAGCTCAC GGGCCTGCCG TTCGTGACCG CGCCCAACAA GTTCGAAGCC ATGGCCAGCG TCGATGCGCT GGTGCATGCC CACGGCGCGC TCAAGACACT TGCCGCCAGC ATGAACAAGA TTGCCAACGA CGTGCGCTGG CTCGCGAGCG GCCCGCGCAG CGGCATCGGC GAACTCAGCA TTCCAGAGAA CGAACCGGGC TCTTCGATCA TGCCGGGCAA GGTCAACCCG ACACAGAGCG AAGCCGTCAC GATGCTGGCC GCGCAGGTGT TCGGCAACGA CGTGGCCATC AACATCGGCG GCGCCTCGGG CAACTTCGAA CTGAATGTGT TCCGCCCGAT GGTGGCGCAC AACTTCCTGC AGAGCGTGCG CCTGCTGGCC GACGGCATGG TGAGCTTCAA CGACCACTGC GCCGTGGGCA TCGAGCCGAA CCGCGAACGC ATCACCGAGC TGGTGCAGCG TTCGCTGATG CTGGTGACGG CGCTCAACAC GCACATCGGC TACGACAAGT CGGCCTACAT CGCGAAGAAG GCGCACAAGG AAGGCACCAG CCTGCGCGAG GCCGCGATTG CTTCGGGCCA CCTCACGGCC GAGCAGTTCG ACCAGTGGGT GGTGCCGGAG AACATGACCG GCCGTTGA
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Protein sequence | MTTSPKTRAE RDTFGPIDVP ADKLWGAQTQ RSLQNFDISG EQQPREIIKA LAQVKRASAV VNHALGLQDE KKTKAIVAAA DEVIAGKHPG EFPLVVWQTG SGTQTNMNVN EVLANRASEL LGGERGEGRL VHPNDDVNRS QSSNDVFPTA MHVAAVEAIT HKLLPAIARL RSTLEQKSKD FADIVKIGRT HLQDATPLTL GQEFSGYVAQ LAHGEAHVRA ALPHLCELAL GGTAVGTGLN APKGYAEQVA AELAKLTGLP FVTAPNKFEA MASVDALVHA HGALKTLAAS MNKIANDVRW LASGPRSGIG ELSIPENEPG SSIMPGKVNP TQSEAVTMLA AQVFGNDVAI NIGGASGNFE LNVFRPMVAH NFLQSVRLLA DGMVSFNDHC AVGIEPNRER ITELVQRSLM LVTALNTHIG YDKSAYIAKK AHKEGTSLRE AAIASGHLTA EQFDQWVVPE NMTGR
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