Gene Vapar_2452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2452 
Symbol 
ID7969516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2603697 
End bp2603942 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content61% 
IMG OID644793034 
Producthypothetical protein 
Protein accessionYP_002944344 
Protein GI239815434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.33973e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAG TCTTGGCGAA CCGGAAGGTG CTGAAGTTGG CAGGAAACAG CCACGCGGAA 
GTGGCGCGAA TCCTTGGATA TGAGGACCGG CGCAACGTCT GGCCCTGGAC CAACGGCCTC
AACCCCTTCC CGCCGTATCA CTGCCGAACC CTCGAAGACC ACTTCAAGGG CCAGATCACG
CGCAAAGAGC TTCGCCCGCA CGACTGGCAG AAGCACTGGC CCGACCTCGC AATCGTGGCC
GCCTGA
 
Protein sequence
MQKVLANRKV LKLAGNSHAE VARILGYEDR RNVWPWTNGL NPFPPYHCRT LEDHFKGQIT 
RKELRPHDWQ KHWPDLAIVA A