| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2451 |
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| Symbol | |
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| ID | 7969515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2603132 |
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| End bp | 2603551 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644793033 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_002944343 |
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| Protein GI | 239815433 |
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| COG category | [K] Transcription |
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| COG ID | [COG1476] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000925763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCCTCG CATCTGCTCG GGATGGCAAG GGAATGACGC AGGATCAAGT GGCCGAGCGG
TTCGGCGTCA ACAAGGCGAC CGTTTCCGCG TGGGAGACCG GGCGCGGAGT GCCGGATGCG
CTGCGCCTGC GCGCCCTGGC CAAGCTCTAC GATGTGAGCG CAGACAGCCT GCTATGGGAA
GATTCACTCT CCCCGGACGC GATGAAATTC GCCGCCGCCT TCGACGGCCT CAATGAACAG
CAGAAGCGCC AGCTCTTTGC AATGTGGGAG GCCTACATCC GAGAGGGTGC CTCAGACGCC
GAGGTCGAGA AAAAGATGCC AGCCACGACG GGGCCCAAGT ACACGCCGCG TGTAAAAGAG
GCATTCCACC CGGCGAACGC AGAAGAGCGC GAGCGGGCGG AAGAAGGCGG GGAGGATTGA
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| Protein sequence | MRLASARDGK GMTQDQVAER FGVNKATVSA WETGRGVPDA LRLRALAKLY DVSADSLLWE
DSLSPDAMKF AAAFDGLNEQ QKRQLFAMWE AYIREGASDA EVEKKMPATT GPKYTPRVKE
AFHPANAEER ERAEEGGED
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