| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2399 |
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| Symbol | |
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| ID | 7970443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2560154 |
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| End bp | 2561017 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792982 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_002944292 |
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| Protein GI | 239815382 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.943735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAG CACTTTCCGA CGCGCCCCAG GGGCCCCTGC GCTACGCACG CGTGCTCTCG
ATCGCCGGCT CCGACAGCGG CGGCGGTGCC GGCATCCAGG CCGACCTGAA GACCTTCGCG
GCGCTCGGCT GCTACGGCAT GACGGCCATC ACGGCGCTCA CCGCGCAGAA CACGCTCGGC
GTGTCGGGCA TCCATGGCGT GCCGCCGGCT TTCCTCAAGG CGCAGATCCA GGCGGTGGTC
GAGGACATCG GCGTGGATGC GGTCAAGCTC GGCATGCTGC ATGCGCCCGA GGTGGTCGAG
GTGGTGGCCT GGGCCATCGA TCACTACCGG CTGCCCAACG TAGTGCTCGA CCCGGTGATG
GTCGCCACCA GCGGCGACCG CCTGATCGCC TCCGAAACCG TGCAGGTGCT GGTGCGCGAG
CTGTTCCCGC GCGCCGTGGT GGTCACGCCC AACCTCGACG AAGCGGCCTT GCTGATCGGC
CATGCGATCG GCGGCATCGA TGCCCTCGAC GATGCGGCCA ACGAACTGCT GGCGCTCGGC
GCGCAGGCCG TGCTGCTCAA GGGCGGGCAC TTGCCGGGCG ACGAGGTGGT CGACGTGCTG
CTGCAGGCGG GCGGCGCTCG AAAGCGGCTG GCCTCGCAGC GCATCGCGAG CCGCAACCTG
CATGGCACGG GCTGCACGCT GTCGTCCGCC ATTGCCGCGC ACCTGGCGCT GGGGCTTGCG
TTGCCCGAGG CCGTCGAATG CGCGCGCGCC TACATCCTCG GCGCGATGGC CGCCGGTGCG
CATGTGAAGA CCGGCGCGGG ACACGGTCCG CTCAACCACG GTTTTGCGCC AGTGCCGACG
CACCGCCTGC CGCCGTCGGC GTAG
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| Protein sequence | MTQALSDAPQ GPLRYARVLS IAGSDSGGGA GIQADLKTFA ALGCYGMTAI TALTAQNTLG
VSGIHGVPPA FLKAQIQAVV EDIGVDAVKL GMLHAPEVVE VVAWAIDHYR LPNVVLDPVM
VATSGDRLIA SETVQVLVRE LFPRAVVVTP NLDEAALLIG HAIGGIDALD DAANELLALG
AQAVLLKGGH LPGDEVVDVL LQAGGARKRL ASQRIASRNL HGTGCTLSSA IAAHLALGLA
LPEAVECARA YILGAMAAGA HVKTGAGHGP LNHGFAPVPT HRLPPSA
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