| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2385 |
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| Symbol | |
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| ID | 7970428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2548638 |
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| End bp | 2549966 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644792967 |
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| Product | histidine kinase |
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| Protein accession | YP_002944278 |
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| Protein GI | 239815368 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.247211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGCG CGCTGACCGG ATCGCTGCGC GCGCGCCTGC TGTGGTTCCT GCTCGCGGCC
ATCGTGCTGG CCGCCGGCGC GCAGGCGCTG GTGGCCTACC GCACGGTGCT GAAGGAGGCC
GACGAGATCT TCGACTACCA CATGCAGCAG ATGGCGCTGT CGCTGCGCGC CGGCCTGCCG
CCGAGCGCGG CCGTGGGCGG CCTGGGCAGC GGCGAGCAGA ACTTCGATTT CGTGGTGCAG
GTGTGGACCG CGGACGGCGT GCGCATCTTC GAATCGGCCG AACAAGCCGC GCTGCCGCAG
CTGGCGGTGC TGGGCTTTGC CGACGTGCGC GCGCGCGGCA CCACCTACCG CGTGTTCTCG
ATGCAGACCA GCGGGCTCGT GATCCAGGTG GCGCAAGACA TGGCGGCGCG CCGCAACATG
GCCGGCGCGC TGGCGCTGCG CACCATCGCA CCGGTGGCTT TGATGGCGCC GCTGCTCATG
CTGGTGGTGT GGTGGGTGGT GAGCCGGTCG CTTGCGCCGG TGTCGCGCGT GCGTGGGCAG
GTCGCCTCGC GGCAGGCCGA CGATCTTTCC CCCGTGAGCG AGGAGAACCT GCCCGACGAG
GTGCGCCCGC TGGTGCAGGA GCTCAACCTG CTGTTCGACC GGGTGCGGCA TGCCTTCGAT
GCGCAGAAGC ACTTCGTCGC CGATGCGGCG CACGAACTGC GCTCGCCGCT GGCCGCGCTG
AAGCTGCAGG TGCAGGGCCT GCAGCGCGCG TCCGATGCCG CGTCGCGCGA GCTGGCCGTG
AGCCGGCTGG TCGCGGGCAT CGACCGCGCG ACGCGCCTGG TCGAGCAGAT GCTTGCGCTG
GCCCGGCATG AGGCCAGCAT GGCGGCGGGG GCAAAGTCCG AACCGGTCGA CATGGGCGAA
GTGGCGCGCC TGGCCATCTC GGACGCGGTC GCGGCGGCGC AGGCCCGGCG CATCGACATC
GGCATCTCGC ATGCCGACCC GGCCGTGGTG AACGGCCAGC CCGAGGCGCT GCGCATGCTG
CTGCGCAACC TGATCGACAA CGCCGTCAAG TACACGCCCG AAGAGGGGCG GGTCGACGTC
GGCATTGCAA GCCTGGGCAC GGCGGTGGAG CTGAGCGTGG ACGACAGCGG CCCCGGCCTG
CCGGAAGAAG AGCGCGAACG CGTGCTCGAC CGCTTCTACC GCTCGGGCGA GCCGCAGGCG
CCGGGCAGCG GGCTCGGCCT GGCCATCGTG AAGTCGATCG CCCAGATGCA CGGCGCCACG
GTGGCGCTTG CGGCCTCGCC GACGCTGGGC GGGCTGCGGG TGCTGGTGCG ATTTGCCGCC
AAGGCCTGA
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| Protein sequence | MIRALTGSLR ARLLWFLLAA IVLAAGAQAL VAYRTVLKEA DEIFDYHMQQ MALSLRAGLP
PSAAVGGLGS GEQNFDFVVQ VWTADGVRIF ESAEQAALPQ LAVLGFADVR ARGTTYRVFS
MQTSGLVIQV AQDMAARRNM AGALALRTIA PVALMAPLLM LVVWWVVSRS LAPVSRVRGQ
VASRQADDLS PVSEENLPDE VRPLVQELNL LFDRVRHAFD AQKHFVADAA HELRSPLAAL
KLQVQGLQRA SDAASRELAV SRLVAGIDRA TRLVEQMLAL ARHEASMAAG AKSEPVDMGE
VARLAISDAV AAAQARRIDI GISHADPAVV NGQPEALRML LRNLIDNAVK YTPEEGRVDV
GIASLGTAVE LSVDDSGPGL PEEERERVLD RFYRSGEPQA PGSGLGLAIV KSIAQMHGAT
VALAASPTLG GLRVLVRFAA KA
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