| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2376 |
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| Symbol | |
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| ID | 7970419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2539502 |
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| End bp | 2540347 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792958 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_002944269 |
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| Protein GI | 239815359 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.157038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAA ACCAATCCGA CGTTCCTGCC GTTCCAGTCA TCCAGGTGAT CGAGCGCATG
TTCGCGCTGA TCGACGTGCT CGCCTCCCGC GAGGAGGCCA TTTCGCTGAA GGAAATCAGC
GAGAAGACGG GCCTGCACCC CTCCACCACC CACCGCATCC TCAACGACCT GGCGGTCGGC
CGCTTTGTCG ACCGGCCCGA GGCCGGCAGC TACCGTCTCG GCATGCGGCT GCTGGAACTC
GGCAACCTCG TCAAGGGCCG GCTCAACGTG CGCGACGCAG CCCTCGGGCC GATGCGCGAG
CTGCACAAGC TCACCCAGCA GCCCGTCAAC CTCAGCATGC GCCAGGGCGA CGAGATCGTC
TACATCGAGC GCTCTTACAG CGAGCGTTCG GGCATGCAGG TGGTGCGCGC CATCGGCGGG
CGGGCCGCCC TGCACCTGAC CTCCACCGGC AAGCTGTTCC TGGCGGCCGA CGATCCGCAG
CGCGTGCGCA GCTACGCCAC GCGAACCGGC CTGGCCGGCC ACACGCGCAA CAGCATCACG
CAGTTGCCCG CGCTCGAGCG CGAGCTGTCG AAGGCGCGCC AGTACGGCAT TGCACGCGAC
AACGAGGAGC TCGAGCTGGG CGTGCGCTGC ATGGCCGCCG GCATCTACGA CGACCAGGGC
AAACTGGTGG CGGGATTGTC GATTTCCGCA CCCGCGGACC GGCTCGACGA AGGATGGCTG
CCCAAGCTGC AGGCCACGGC CAACGAGATC TCGGGAGCGC TGGGCTACAA GGATGCCGCA
GCGGCGGCGG CCGCGGGCCC TGCGGCAATC GGTGCCAGCA GCGCTTCAGG CCCCAGCGGG
GGCTGA
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| Protein sequence | MRKNQSDVPA VPVIQVIERM FALIDVLASR EEAISLKEIS EKTGLHPSTT HRILNDLAVG
RFVDRPEAGS YRLGMRLLEL GNLVKGRLNV RDAALGPMRE LHKLTQQPVN LSMRQGDEIV
YIERSYSERS GMQVVRAIGG RAALHLTSTG KLFLAADDPQ RVRSYATRTG LAGHTRNSIT
QLPALERELS KARQYGIARD NEELELGVRC MAAGIYDDQG KLVAGLSISA PADRLDEGWL
PKLQATANEI SGALGYKDAA AAAAAGPAAI GASSASGPSG G
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