| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2357 |
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| Symbol | hppA |
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| ID | 7970400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2519446 |
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| End bp | 2521974 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792939 |
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| Product | membrane-bound proton-translocating pyrophosphatase |
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| Protein accession | YP_002944250 |
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| Protein GI | 239815340 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3808] Inorganic pyrophosphatase |
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| TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.131798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGGCA ACACCCCCCT GATACTCGCC ATCGTCTGCG GCCTCGTGGC CGTCGGCTAC
GGTTTCTGGG CCCGAAGTTG GATTCTCGCC AAGGACCCGG GCAACGCGCG GATGCAGGAA
ATCGCGGCCG CCATCCAGGC CGGCGCATCG GCCTACCTCG CCAAGCAGTA CACCACCATC
GCGGTGGTCG GCGTGGTCCT GGCCATTCTC ATCGGCATCT TCCTGGACGC GACCACGGCC
ATCGGCTTCG TGGTGGGCGC GGTGCTTTCG GGCGCCTGCG GGTTCATCGG CATGAACGTG
TCGGTGCGCG CCAACGTGCG CACCGCGCAG GCGGCCACGC AAGGCATCGG CCCGGCGCTG
GACGTCGCAT TCCGCGGCGG CGCCATCACG GGCATGCTGG TGGTGGGGCT GGGCCTCCTG
GGCGTCTCGG TCTTCTACTG GTTCCTGGCG GGCAACGGCA ACCTCACGCC GGACCGCAGC
CTCTCGGCCA TCCTCAATCC GCTGATCGGC TTTGCCTTCG GCTCCTCGCT GATCTCGATC
TTCGCGCGGC TGGGCGGCGG CATCTTCACC AAGGGCGCCG ACGTGGGCGC CGACCTGGTG
GGCAAGGTCG AGGCCGGTAT TCCGGAAGAC GACCCGCGCA ACCCGGCGGT GATTGCCGAC
AACGTGGGCG ACAACGTCGG CGACTGCGCC GGCATGGCGG CCGACCTGTT CGAGACCTAT
GCCGTCACGC TGATCGCCAC CATGGTGCTG GGCGCGCTGA TGGTCACGGC GGCGCCGCTC
AATGCGGTGC TCTATCCGCT GGCACTGGGC GGCGTGTCGA TCATCGCGTC GATCATCGGC
TGCTTCTTCG TCAAGGCCTC GCCGGGCATG ACCAACGTGA TGCCGGCGCT CTACAAGGGG
CTGGCGGTGG CGGGCCTCCT GTCGCTGATC GCGTTCTGGT TCGTCACGAG CTGGCTCATC
CCCGACAACG CCATTGCCCC GAGCGGCAGC CAGCTCAAGC TGTTCGGCGC CTGCTTCGTG
GGCCTGGCGC TCACGGCCGC GCTGGTGTGG ATCACCGAGT ACTACACCGG CACGCAGTAC
AAGCCGGTGC AGCACATCGC GCAGGCTTCC ACCACGGGCC ACGGCACCAA CATCATCGCG
GGCCTGGGCG TCTCGATGCG TTCGACGGCA TGGCCGGTGA TCTGCGTCTG CGTGGCCATC
ATGGCCTCAT ATGCGCTCGC CGGGCTGTTC GGCATTGCGG TGGCCGCCAC GGCCATGCTG
AGCATGGCGG GCATCGTGGT GGCGCTCGAC GCCTACGGTC CCATCACCGA CAACGCCGGC
GGCATCGCCG AGATGAGCGA GCTGCCCGAC AGCGTGCGCG CCGTGACCGA CCCGCTCGAT
GCCGTGGGCA ACACCACCAA GGCCGTGACC AAGGGCTACG CGATCGGCTC GGCCGGCCTC
GCCTCGCTGG TGCTCTTTGC CGACTACACC CACAAGCTGG AGAGCTTCGG GCTGAACATC
AGCTTCAACC TGAGCGACCC GATGGTGATC GTCGGCCTGT TCATCGGCGG GCTGATTCCC
TACCTGTTCG GCGCCATGGC CATGGAGGCC GTGGGCCGGG CGGCCGGCGC GGTGGTCGAG
GAGGTGCGCC GGCAGTTCCG CGAGATCCCC GGCATCATGG AAGGCACCGG CAAGCCCGAG
TACGGCAAGG CCGTGGGCAT GCTGACCGGC GCGGCCATCA AGGAAATGAT GATCCCCTCG
CTGCTGCCGG TGGTGGTGCC GATCCTGGTC GGGCTGGTGC TCGGGCCCAA GGCGCTGGGC
GGCCTGCTGA TGGGCACCAT CGTGACCGGC CTGTTCGTCG CCATCTCGAT GTGCACGGGC
GGCGGCGCAT GGGACAACGC CAAGAAGTAC ATCGAGGACG GCCACCACGG CGGCAAGGGC
TCCGAGGCGC ACAAGGCGGC CGTCACCGGC GACACCGTGG GCGACCCCTA CAAGGACACG
GCCGGCCCGG CGGTGAATCC GCTGATCAAG ATCATCAACA TCGTGGCGCT GCTGATCGTG
CCGCTGGTGG TCAAGTTCCA TGCCGGCGAT GCGGCCGCGG CCGTGCCGCA CAAGGTCGAG
ATGCCTCCGG CAGCGACCGC GCCGGCCGCC GCTGCCCAGC CCTCCGCGCC CGCAGCGCCG
GTGGCGGCAG TGGCCTCCGG CACCGTGGCA GCCGCCGACG CCGCGGCCGT GAAGGTCGAG
AACGGCGTGG TGAAGTTCTA CTTCGAGAGC GGCAAGGCCG AGGTCGCGCC CAATGCCAAG
GAAGCACTGG CCGATGTCAT CAAGGCCGTG CAGAGCGGCA GCGTGCTGCT CGTGAGCGGC
TACCACGATG CAAGCGGCGA TCCGGCCAAG AACGCCGAGC TCGCCAAGCA GCGCGCCGTG
GCCGTGGGCG ATGCGCTCAA GGCCGCCGGC GCCCCCGCGG ACAAGATCGA GCTTGCCAAG
CCCGAGCAGA CCCAGGCGGA CGGGCCCGCG AGCGAAGCCC GCCGCGTCGA AGTGAAGGTC
AAGGCCTGA
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| Protein sequence | MIGNTPLILA IVCGLVAVGY GFWARSWILA KDPGNARMQE IAAAIQAGAS AYLAKQYTTI
AVVGVVLAIL IGIFLDATTA IGFVVGAVLS GACGFIGMNV SVRANVRTAQ AATQGIGPAL
DVAFRGGAIT GMLVVGLGLL GVSVFYWFLA GNGNLTPDRS LSAILNPLIG FAFGSSLISI
FARLGGGIFT KGADVGADLV GKVEAGIPED DPRNPAVIAD NVGDNVGDCA GMAADLFETY
AVTLIATMVL GALMVTAAPL NAVLYPLALG GVSIIASIIG CFFVKASPGM TNVMPALYKG
LAVAGLLSLI AFWFVTSWLI PDNAIAPSGS QLKLFGACFV GLALTAALVW ITEYYTGTQY
KPVQHIAQAS TTGHGTNIIA GLGVSMRSTA WPVICVCVAI MASYALAGLF GIAVAATAML
SMAGIVVALD AYGPITDNAG GIAEMSELPD SVRAVTDPLD AVGNTTKAVT KGYAIGSAGL
ASLVLFADYT HKLESFGLNI SFNLSDPMVI VGLFIGGLIP YLFGAMAMEA VGRAAGAVVE
EVRRQFREIP GIMEGTGKPE YGKAVGMLTG AAIKEMMIPS LLPVVVPILV GLVLGPKALG
GLLMGTIVTG LFVAISMCTG GGAWDNAKKY IEDGHHGGKG SEAHKAAVTG DTVGDPYKDT
AGPAVNPLIK IINIVALLIV PLVVKFHAGD AAAAVPHKVE MPPAATAPAA AAQPSAPAAP
VAAVASGTVA AADAAAVKVE NGVVKFYFES GKAEVAPNAK EALADVIKAV QSGSVLLVSG
YHDASGDPAK NAELAKQRAV AVGDALKAAG APADKIELAK PEQTQADGPA SEARRVEVKV
KA
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