| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2338 |
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| Symbol | |
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| ID | 7971196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2502591 |
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| End bp | 2503370 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792920 |
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| Product | hydroxyacylglutathione hydrolase |
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| Protein accession | YP_002944231 |
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| Protein GI | 239815321 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.594028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTTG TTCCGCTGCC CGCCTTCGCT GACAACTACA TCTGGATGCT GCAGGACGGG
TCCAACGCGA TCGTGGTGGA CCCGGGCGAC GCCCAACCGG TGTTCGACGC CTTGGCGCGC
GACAAGCTGC AGCTCGCCGC GATTCTAGTC ACGCACCATC ACCCCGATCA CACGGGCGGC
GTGGCCGCGC TCCATGCCGC CACCGGCGCG CCGGTCTTCG GTCCGGCACG CGAACGCATT
CCGCAGCCCT TCAAGCCGCT GTCGCATGGC GACACCGCCG AGGTGCTCGG GCTGCGCTTT
TCGGTCATCG ACGTGCCTGG CCACACGGCC GGCCACATCG CCTACTTCCT GCCCGCAAGC
GCAGGCCGGG CGCCGCTTCT TTTTTGCGGC GACACGCTGT TCTCCGGCGG CTGCGGCCGG
CTGTTCGAAG GCACGCCAGC GCAGATGCTG GCCTCGCTCG ATGCGCTGGC GGCGCTGCCG
GGCGACACCC GCGTGTGCTG CGCGCACGAA TACACACTTG CTAACCTGCG TTTCGCCCGC
GCGGTGGAAC CCGGCAATGC CGATCTGACT CAGTACAGCG CGCACTGCGA AAGCCTGCGC
GCGCAGGGGC GGCCCACGCT GCCCTCGCAA CTGGCCACCG AACGCCGGAT CAACCCCTTT
CTTCGCAGCC GCGAAGCCAC TGTCCTTAGA GCGGTGCGCG AGCACGCCGA GCTTTCCGCC
GATGCGGCCG AAGCCGAGGT GTTCGCTGCG CTGCGCCAAT GGAAAAACGA CTTCCGATGA
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| Protein sequence | MTLVPLPAFA DNYIWMLQDG SNAIVVDPGD AQPVFDALAR DKLQLAAILV THHHPDHTGG
VAALHAATGA PVFGPARERI PQPFKPLSHG DTAEVLGLRF SVIDVPGHTA GHIAYFLPAS
AGRAPLLFCG DTLFSGGCGR LFEGTPAQML ASLDALAALP GDTRVCCAHE YTLANLRFAR
AVEPGNADLT QYSAHCESLR AQGRPTLPSQ LATERRINPF LRSREATVLR AVREHAELSA
DAAEAEVFAA LRQWKNDFR
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