| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2330 |
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| Symbol | |
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| ID | 7971188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2494649 |
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| End bp | 2496511 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792912 |
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| Product | DNA polymerase III, subunits gamma and tau |
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| Protein accession | YP_002944223 |
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| Protein GI | 239815313 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTATC TCGTGCTCGC TCGCAAGTTC CGTCCGAAAA CCTTCGGTGA GATGGTTGGC
CAGGGGCATG TGGTGCAGGC GCTCGAGAAC GCGTTGACCA CGCAGCGCCT GCATCACGCC
TATCTTTTCA CCGGGACGCG GGGCGTGGGC AAGACCACGG TTTCCCGCAT CCTGGCCAAG
TCGCTCAATT GCCAGGGGCC GGACGGGCAG GGCGGCATCA CGGCCACGCC TTGCGGGGTG
TGCCAGGCCT GCAAGGACAT CGATTCAGGC CGCTTCGTCG ACTACACCGA GCTCGACGCG
GCATCGAACC GCGGCGTGGA CGAGGTGCAG TCGCTGCTCG AGCAGGCGGT CTACAAGCCG
GTGCAGGGGC GCTTCAAGGT CTTCATGATC GACGAAGTGC ACATGCTCAC CAACACCGCG
TTCAACGCGA TGCTGAAGAC GCTCGAGGAG CCGCCGGAAT ACCTCAAGTT CGTGCTGGCC
ACCACCGATC CGCAGAAGGT CCCGGTCACG GTGCTGTCGC GCTGCCTGCA GTTCAACCTG
CGGCCGATGG CGCCCGAGAC GGTGCTGGAG CACCTCACGG GCGTGCTGCA GGCCGAACAG
GTGCCGGCCG AGCCGCAGGC GCTGCGCCTG CTGGCGCGTG CGGCACGCGG CTCGATGCGC
GACGCGCTGT CGCTCACCGA CCAGGCCATT GCCTTCGGTA ACGGCGAACT GCTCGAAGCC
GGCGTGCGCC AGATGCTCGG CAGTGTGGAC CGTGGCCATG TGTTCAAGCT GATCGAGGCG
CTGGCGCTGG GCGATGGCAG GACGGTGGTC GACACCTCCG AGGCGCTGCG GCGCGACGGC
ATGTCCGCCG CGTCCACGCT GGAAGAAATG ACCGCGGTGC TGCAGGCCAT GGCCGTGCTG
CAGGCGGTGC CGTCGCGGGC GGAATCGGCC GATTCGGCCA CCGATCCCGA CGCGGCCGAT
ACGGCGCGCC TCGCGTCGCT GATGCCGGCC GACGAAACGC AGCTGCTCTA CAGCCTGTGC
CTGCACGGGC GCGGCGAGCT GGGGCTGGCG CCCGACGAGT ACGCGGCGCT GACCATGGTG
CTGCTCAGGC TCCTGGCCTT CAAGCCTTCC AACGCGGCCG CTTCTTCGGC CTCCGCGGAA
AAAAAAACTC TGAATGAAGC CGCCCGGGCG GCTTCGGTCC CTGCGCCCGT AGCGCCGGCT
CATCAAGACA CGGCGGCGAT CGCCGCGCCG CCAGCGTCGA TTTCCGTCGC TGCGCCGGTG
CCTCCTCGAT CCAATCCGGC GCCGGCCGGC CAGCGCCTGG CCGTGGTCAA CGAGCCCGTG
CGGCCAAACG GGCCCAGGCC TTCCGCAGAA ATCGAGCCCT CGCCGGCTGC CGAGGCGCCC
CGGGTGCTTG CCGTTCCCAT GCGCGTGCAG CCGCCGCCGA GCCAGCGCGA CGCGCCGCGC
CCCGATGAGC AGCGCGGCCC GGCACCGCCC ATTCCGCCGA GCGAGGACGG CGACTTCTGG
CACGCCACGG TCACGCAGAT GATCGCGGCC GAGAGCATCA ACGCCCTCGC GCGCGAACTC
GCGCTGCAGT CGCAGCTGGT GGCGCGCGAC GTCGACCAGT GGATACTTCG CGTCGAGCGC
GAGCTGCTCA ACCAGCCTTC GGCCCGCGAG AAGCTCACGG ATGCACTGGC CGCGCTGGGT
CACGGCGTGA AGCTCGCCAT CGAGATCGGC GCCGTGGTCG ACAGCCCCGC GCGCCGCAAC
AAGCAGGCGG CCGACGAGCG CCAGCGCGTG GCCGAGGAGG CCATCCGCAG CGATCCCGAA
GTGCAGATGC TGATGCGCGA ATTCGATGCG AAGATCGTGC CTGGAACACT CAAGCCCGCC
TGA
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| Protein sequence | MSYLVLARKF RPKTFGEMVG QGHVVQALEN ALTTQRLHHA YLFTGTRGVG KTTVSRILAK
SLNCQGPDGQ GGITATPCGV CQACKDIDSG RFVDYTELDA ASNRGVDEVQ SLLEQAVYKP
VQGRFKVFMI DEVHMLTNTA FNAMLKTLEE PPEYLKFVLA TTDPQKVPVT VLSRCLQFNL
RPMAPETVLE HLTGVLQAEQ VPAEPQALRL LARAARGSMR DALSLTDQAI AFGNGELLEA
GVRQMLGSVD RGHVFKLIEA LALGDGRTVV DTSEALRRDG MSAASTLEEM TAVLQAMAVL
QAVPSRAESA DSATDPDAAD TARLASLMPA DETQLLYSLC LHGRGELGLA PDEYAALTMV
LLRLLAFKPS NAAASSASAE KKTLNEAARA ASVPAPVAPA HQDTAAIAAP PASISVAAPV
PPRSNPAPAG QRLAVVNEPV RPNGPRPSAE IEPSPAAEAP RVLAVPMRVQ PPPSQRDAPR
PDEQRGPAPP IPPSEDGDFW HATVTQMIAA ESINALAREL ALQSQLVARD VDQWILRVER
ELLNQPSARE KLTDALAALG HGVKLAIEIG AVVDSPARRN KQAADERQRV AEEAIRSDPE
VQMLMREFDA KIVPGTLKPA
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