Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2317 |
Symbol | |
ID | 7971174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2476190 |
End bp | 2477485 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644792899 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_002944210 |
Protein GI | 239815300 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR02966] phosphate regulon sensor kinase PhoR |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.837858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGTGG GCGCTGCAGC CATTTTCGGC TGGAAGTTCG GATGGCTGGG TGCCTGGCTG GGCGCGGTGC TGTGGCTCGC GCTCGACGCC TGGCGGGCCG AGCGCCTGCT CAAGGTGCTT CGCAACAACG CGGCGGGCCT GCCGACGCGC GGCGCCGGCG TGTGGGGCGA GCTCGCGGAG CGCATCCGCA AGCTGCTGCG CGACCGCGAA CAGCAGACCC GCCAGGCCGA GGACCGCCTG CAGGAATTCC TGGCCGCCAT CCAGGCCTCT CCCAACGGCG TGATCCTGCT CGACGAGCAG GGCCGCATCG AGTGGTGCAA CCAGACGGCA GCCGGGCAGT TCGGCATCGA TGCCGAGCGG GATCTGCTGC AGCATCTGGC CAATCTGGTC CGCGACCCGG CCTTCGTGGC CTACCTGGCC TCGTGGAACT ACAGCCGCGA TGTGGTCATC GATGCCTCAG GCCCCGGGCA GGGGCACCAG CGCAGCCATC CGGTGCGCCT GTCGGTGCAG GTGCATCCCT ATGCGGGCAA CCGCCGCATG CTGCTGACGC GCGACATCAC GGCGGTCGAG CAGGCCGAGG CCATGCGGCG CGACTTCGTT GCCAATGTTT CGCACGAGAT CCGCACGCCG CTCACCGTGC TGGCGGGTTT TGTGGAAACG CTGCAGAACC TGCCGCTCGA TGCGGACGAG CGCGCGCGCT ACCTCTCGCT CATGAGCCAG CAGTCGCACC GCATGGAAAC CCTGGTCAAC GACCTGCTGA CGCTGTCGCG GCTCGAGGGT AGCGCGGCGC CATCGGGCAA CCAGTGGATC CGCATCCGTG CGCTGCTCGC CCAGTGCGAA GACGAGGGAC GGGGCTTGTC GGGCCGGCTC GCGCCGCAGG GGCATCGCCT TTCCTTCACG ATCGAGGCCG AATCCGAGAT TTCGGGCGCC CCGACAGAGC TGCAAAGCGC CATGTCGAAC CTGCTGAGCA ACGCCATCCG CTACACGCCC GGCGGCGGCG AGGTCGCGGT GAGCTGGCGG CTGCTGCCCG ACGGGCGCGG CGAATACGCG GTGCGCGACA CCGGCCCCGG CATTGCCGCC GAGCACATCC CGCGCCTGAC CGAACGCTTC TACCGCATCG ACCGCAGCCG CTCGCGCGAA ACCGGTGGCA CCGGCCTGGG CCTGGCCATC GTGAAGCACA TCGCGCAGCG GCATGGCGCC GAACTGCGGA TCCAGAGCAC GGTGGGCAAG GGCTCGCGTT TCGCGCTGGT GTTCCCGGCA ACCCGCGTGC GGGAAGCGCG GCTGCTAGCG AAGTGA
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Protein sequence | MGVGAAAIFG WKFGWLGAWL GAVLWLALDA WRAERLLKVL RNNAAGLPTR GAGVWGELAE RIRKLLRDRE QQTRQAEDRL QEFLAAIQAS PNGVILLDEQ GRIEWCNQTA AGQFGIDAER DLLQHLANLV RDPAFVAYLA SWNYSRDVVI DASGPGQGHQ RSHPVRLSVQ VHPYAGNRRM LLTRDITAVE QAEAMRRDFV ANVSHEIRTP LTVLAGFVET LQNLPLDADE RARYLSLMSQ QSHRMETLVN DLLTLSRLEG SAAPSGNQWI RIRALLAQCE DEGRGLSGRL APQGHRLSFT IEAESEISGA PTELQSAMSN LLSNAIRYTP GGGEVAVSWR LLPDGRGEYA VRDTGPGIAA EHIPRLTERF YRIDRSRSRE TGGTGLGLAI VKHIAQRHGA ELRIQSTVGK GSRFALVFPA TRVREARLLA K
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