| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2220 |
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| Symbol | |
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| ID | 7969934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2365709 |
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| End bp | 2366491 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792808 |
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| Product | 3-hydroxybutyrate dehydrogenase |
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| Protein accession | YP_002944121 |
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| Protein GI | 239815211 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTCA AGGACAAGGT CGCCTACATC ACCGGTTCGG CCAGCGGCAT CGGCAAGGAG
ATTGCCATCC TGTTCGCGCG CGAGGGGGCC AAGGTCGTCA TTGCCGACCT CAACAAGCAG
GCCGCCGAGG CCACCGCGGC CGAGCTCCAG GCAACGGGCG CGCAGGCCCT GGGCGTGGCG
GTGGACGTGA CCAGCGAAGA GCAGGTCGAT GCCTCGGTCG AGGAGGCCGC CAAGGCCTTC
GGCGGCATCG ACATCCTGGT CAGCAACGCG GGCGTGCAGA TCGTTCATCC GGTCGAGGAA
TTCAGCTTTG CCGACTGGAA GAAGATGCTC GCGATCCATC TCGACGGCGC ATTCCTCACC
ACCAAGGCCT GCCTCAAGCA CATGTATGCG CAGGGCCGCG GCGGCAGCGT GATCTACATG
GGATCGGTGC ACTCCAAGGA AGCTTCGCTG CTGAAGGCGC CCTACGTGAC CGCCAAGCAC
GGGCTCATCG GCCTGGCCAA GACGGTGGCG AAGGAAGGCG CGAAGCACGG CGTGCGCGCC
AACGTGATCT GCCCGGGCTT CGTTCGCACG CCGCTGGTCG AGAAGCAGAT TCCCGAGCAG
GCGAAGACGC TCGGCATCAC CGAGGAGCAG GTCGTCAAGA ACGTGATGCT GAAGGAAACG
GTCGATGGCG AATTCACCAC CACCGACGAT GTGGCGCGCG TGGCGCTGCT GTTCGCGGCC
TTCCCGACCA ATGCGCTGAC CGGCCAGTCG CTGGTGGTGA GCCACGGCTG GTTCATGCAG
TAG
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| Protein sequence | MQLKDKVAYI TGSASGIGKE IAILFAREGA KVVIADLNKQ AAEATAAELQ ATGAQALGVA
VDVTSEEQVD ASVEEAAKAF GGIDILVSNA GVQIVHPVEE FSFADWKKML AIHLDGAFLT
TKACLKHMYA QGRGGSVIYM GSVHSKEASL LKAPYVTAKH GLIGLAKTVA KEGAKHGVRA
NVICPGFVRT PLVEKQIPEQ AKTLGITEEQ VVKNVMLKET VDGEFTTTDD VARVALLFAA
FPTNALTGQS LVVSHGWFMQ
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