| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2202 |
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| Symbol | |
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| ID | 7969916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2352393 |
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| End bp | 2353256 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644792790 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002944103 |
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| Protein GI | 239815193 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCAGC TGACAAGACT CCCCGCCCCC TGCCTGCGTC CCTACGTGCG GCTGATGTGG
GCCTCGGCCC CCACGGGCGC GGCCGCCGGG CAGCCGGGCG CGCGCGAACA CGTGCTGCCC
ACCGGGGGCA TGCACCTGGT GTTCCGGCTC TCGGGGCCGC CGCTGAAGCT GTTCGGCGGC
CCGGGCGACG TGCGCGGCCA GACCTGCGGC CATGCGATCG TCGGCGGTGC ACGTGCCGCC
CCCTACATGC GCGACGTTTC GGTGGCCACG CGCTCGGTCG GCGCGCAGCT CCAGCCAGGG
GCCGCCCGCG CGCTGCTCGG CGCACCCGAA GACGCGCTGG CCGGCCAGCA CACGCCGCTC
GATGCGCTCT GGGGTGCGCA GCAGGCCAAC GCCGCGCTCG AACGGATCCA CGCGGCGGGC
AGCCTCGAAG CGCAGCTGGC GGTCTTCGAA GCCTTGCTCG CCCAGCGCGC CATCGATTCG
CAAGGCGCCG GCCTGCGCGG CCTGCACCCG GCCGTCGCCG CAGCGCTCGG TCCGCTGGCG
CGCGAGAACC CGCCGATCGC CGCGCTGGTG GCACGCAGCG GCTACAGCCA CCGCCGCTTC
ATCGCCCTTT TTCGCAGCGG CATCGGCCTC GGCCCGAAGG AATATGCGCG GGTGATGCGC
TTCGACCGCG CGCTGGCGCT GGCCGGTGGC CCGGTGCAGA GCTGGGCCGA GATCGCGCTC
GCCGCGGGCT ACAGCGACCA GGCGCACCTG AGCCGCGAGT TCTCGGCGCT GGCGGGCATG
CCGCCAGAGG CCTGGCGGCA GTCCGGGGCT GTGTCGCCTC GGCATGTGCC GGCGGCCGCA
GGTCAAATTC GTTCAAGACG CTAG
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| Protein sequence | MPQLTRLPAP CLRPYVRLMW ASAPTGAAAG QPGAREHVLP TGGMHLVFRL SGPPLKLFGG
PGDVRGQTCG HAIVGGARAA PYMRDVSVAT RSVGAQLQPG AARALLGAPE DALAGQHTPL
DALWGAQQAN AALERIHAAG SLEAQLAVFE ALLAQRAIDS QGAGLRGLHP AVAAALGPLA
RENPPIAALV ARSGYSHRRF IALFRSGIGL GPKEYARVMR FDRALALAGG PVQSWAEIAL
AAGYSDQAHL SREFSALAGM PPEAWRQSGA VSPRHVPAAA GQIRSRR
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