| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2197 |
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| Symbol | |
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| ID | 7969911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2348055 |
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| End bp | 2349215 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644792785 |
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| Product | histidyl-tRNA synthetase 2 |
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| Protein accession | YP_002944098 |
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| Protein GI | 239815188 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
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| TIGRFAM ID | [TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCT GGGTCCTCCC GGATCACATT GCCGATGTGC TGCCTTCCGA GGCGCGCCAC
ATCGAAGAAC TTCGACGCCA GCTGCTCGAT ACCGCCCGTG GCTATGGCTA CGAGCTGGTG
ATGCCGCCGC TGCTCGAGCA CCTCGAGTCG CTGCTGTCCG GCACCGGCGA GGCGCTCGAC
CTCCAAACCT TCAAGCTGGT CGACCAGCTC TCCGGCCGCA GCATGGGCCT GAGGGCCGAC
ACCACGCCCC AGGTGGCGCG CATCGACGCC CACCTGCTGA ACCGCGAAGG CGTGGCACGG
CTGTGCTACT GCGGACCGGT GCTGCACACC CGCCCCGACC GGCCGCATGC CACGCGCGAG
CCGCTGCAGT TCGGGGCCGA GATCTACGGC CATGCGGGGC TCGAGGCCGA CACCGAAGTG
CTGCTGCTGG CGCTCGACTG CCTGCATGCA TCGGGCCTGA GCGACGGCGT GATCGTCGAC
CTGGCGGATG CGCGCATCGT GCGGGCGCTG TTCGCCGGCG TGCCGGTCGA CGCCGCCGTG
CTGGCGCGCG TGCATGCGGC GCTGGTTGCC AAGGATGCGA GCGAGCTGCA TGCGCTCACG
CGCAGTTTCC CGGCCGCGTC GCGCGACGGC CTGCGCGCGC TGGTCCAGCT GTATGGCGAT
GCGTCGGTGC TCGACGAGGC CGCCAAGGCC CTCAAGGGCA CGCCGGCCGT GAGCGCGGCG
CTGGCCGGAT TGAAGCAGCT GGCCGCGAGC CTCGGTGCCG ATCCGGCGCG GCAGATCAGC
TTCGACCTGG CCGACCTGCG CGGGTATGCC TACTACAGCG GCATGCGCTT CGGCATCTAC
GTGCCGGGCG CGGCCGATGC GCTGGTGCGC GGCGGGCGCT ACGACGAAGT CGGCGCCGTG
TTCGGCCGCA ACCGGCCGGC GGTCGGCTTC AGCCTGGACG TGCGCGAACT GGTCGGCGTG
CTGCCGGCGC GTCCGCTGCG CGCGGCCATC CGCGCGCCCT GGAGCGACGC GGCCGGCCTG
CGCGAGGCCA TTGCCGGGCT GCGCAAGGCC GGCGAGATCG TGGTCTGCGT ACTGCCGGGC
CACGGCAGCG AAATCGATGA ATTCCACTGC GACCGCGAGC TCGTCGAGCA CGCAGGGCAG
TGGCAAGTCC GAGCCCTCTG A
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| Protein sequence | MSAWVLPDHI ADVLPSEARH IEELRRQLLD TARGYGYELV MPPLLEHLES LLSGTGEALD
LQTFKLVDQL SGRSMGLRAD TTPQVARIDA HLLNREGVAR LCYCGPVLHT RPDRPHATRE
PLQFGAEIYG HAGLEADTEV LLLALDCLHA SGLSDGVIVD LADARIVRAL FAGVPVDAAV
LARVHAALVA KDASELHALT RSFPAASRDG LRALVQLYGD ASVLDEAAKA LKGTPAVSAA
LAGLKQLAAS LGADPARQIS FDLADLRGYA YYSGMRFGIY VPGAADALVR GGRYDEVGAV
FGRNRPAVGF SLDVRELVGV LPARPLRAAI RAPWSDAAGL REAIAGLRKA GEIVVCVLPG
HGSEIDEFHC DRELVEHAGQ WQVRAL
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