Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2193 |
Symbol | |
ID | 7969907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2344266 |
End bp | 2345435 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644792781 |
Product | GTP-binding proten HflX |
Protein accession | YP_002944094 |
Protein GI | 239815184 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCTGAAT TGAACTCCCG CCAGGAAGGC GCCGCCGTTC TCGTCGGCGT CGATTTCGGG CTGCCCCATT TCGACAGCGA ACTCGAGGAA CTCGGCCTGC TCGCGCAGAC CGCGGGCCTT TCGCCTGTCG CGCGCCTCGT CTGCAAGCGC AAGGCGCCCG ACGCCGCACT TTTCGTTGGA AGCGGCAAGG CCGAAGAAAT CAAGGAACTG GCCGCCATGC ACCAGGCCAG CGAGGTCATC TTCGACCAGT CGCTGAGCCC GGCGCAGCAG CGCAACCTCG AGCGCCAGCT CGACGTGGCG GTGTACGACC GCACCTTCCT CATCCTCGAG ATCTTTGCCC AGCGCGCCCG CTCCCATGAG GGCAAGCTGC AGGTCGAGCT GGCTCGCCTG CAGTACCTGA GCACGCGCCT GGTTCGCCGC TGGTCCCACC TGGAGCGCCA GACGGGCGGT GCCGGCGTGC GCGGCGGTCC CGGCGAAAAG CAGATCGAGC TCGACCGCCG GATGATCAGC GAATCGATCA AGCGCACGCG CGAGCGGCTG GCCAAGGTGC AGAAGCAGCG CGGCACGCAG CGCCGCCAGC GCGAGCGCCG CGAGACCTTC AACATCTCGC TCGTGGGCTA TACCAACGCG GGCAAGTCGT CGCTGTTCAA TGCGCTGGTC AAGGCTCGCG CGTATGCGGC CGACCAGCTC TTTGCCACGC TCGACACCAC CACGCGCAAC CTCTACCTGG GCGATGCCCG CAGGCAGGTC TCGATCTCCG ACACCGTCGG CTTCATCCGC GACCTGCCGC ACGGGCTGGT CGACGCCTTC AAGGCCACGC TGCAGGAGGC CGTCGATGCC GACTTGCTGC TGCACGTGGT CGATGCCTCC AATCCGCACT ACCCGGAGCA GATGGCCGAG GTGCAGTCCG TGCTCCGCGA CATCGGCGCC GACACCGTCC CGCAGCTTCT GGTGTTCAAC AAGCTCGATG CCCTTGAAAC TGCGCAGCAC CCGCTGCATC TGCAGGACGA CATGGAAATC GACGGCGTGC GGGTTCCGCG CATCTTCCTC AGCGCCCGCA GCGGCGAGGG ACTGCCCCTG CTGCGCGCCG AGCTGGCCCG CCGGTCGGGC TCCCTGGGCG ACGCGATGAC CCCAGAGGCC GACACTGAAT TGCACGACAC CGCCAATTGA
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Protein sequence | MSELNSRQEG AAVLVGVDFG LPHFDSELEE LGLLAQTAGL SPVARLVCKR KAPDAALFVG SGKAEEIKEL AAMHQASEVI FDQSLSPAQQ RNLERQLDVA VYDRTFLILE IFAQRARSHE GKLQVELARL QYLSTRLVRR WSHLERQTGG AGVRGGPGEK QIELDRRMIS ESIKRTRERL AKVQKQRGTQ RRQRERRETF NISLVGYTNA GKSSLFNALV KARAYAADQL FATLDTTTRN LYLGDARRQV SISDTVGFIR DLPHGLVDAF KATLQEAVDA DLLLHVVDAS NPHYPEQMAE VQSVLRDIGA DTVPQLLVFN KLDALETAQH PLHLQDDMEI DGVRVPRIFL SARSGEGLPL LRAELARRSG SLGDAMTPEA DTELHDTAN
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