Gene Vapar_2193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2193 
Symbol 
ID7969907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2344266 
End bp2345435 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content67% 
IMG OID644792781 
ProductGTP-binding proten HflX 
Protein accessionYP_002944094 
Protein GI239815184 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTGAAT TGAACTCCCG CCAGGAAGGC GCCGCCGTTC TCGTCGGCGT CGATTTCGGG 
CTGCCCCATT TCGACAGCGA ACTCGAGGAA CTCGGCCTGC TCGCGCAGAC CGCGGGCCTT
TCGCCTGTCG CGCGCCTCGT CTGCAAGCGC AAGGCGCCCG ACGCCGCACT TTTCGTTGGA
AGCGGCAAGG CCGAAGAAAT CAAGGAACTG GCCGCCATGC ACCAGGCCAG CGAGGTCATC
TTCGACCAGT CGCTGAGCCC GGCGCAGCAG CGCAACCTCG AGCGCCAGCT CGACGTGGCG
GTGTACGACC GCACCTTCCT CATCCTCGAG ATCTTTGCCC AGCGCGCCCG CTCCCATGAG
GGCAAGCTGC AGGTCGAGCT GGCTCGCCTG CAGTACCTGA GCACGCGCCT GGTTCGCCGC
TGGTCCCACC TGGAGCGCCA GACGGGCGGT GCCGGCGTGC GCGGCGGTCC CGGCGAAAAG
CAGATCGAGC TCGACCGCCG GATGATCAGC GAATCGATCA AGCGCACGCG CGAGCGGCTG
GCCAAGGTGC AGAAGCAGCG CGGCACGCAG CGCCGCCAGC GCGAGCGCCG CGAGACCTTC
AACATCTCGC TCGTGGGCTA TACCAACGCG GGCAAGTCGT CGCTGTTCAA TGCGCTGGTC
AAGGCTCGCG CGTATGCGGC CGACCAGCTC TTTGCCACGC TCGACACCAC CACGCGCAAC
CTCTACCTGG GCGATGCCCG CAGGCAGGTC TCGATCTCCG ACACCGTCGG CTTCATCCGC
GACCTGCCGC ACGGGCTGGT CGACGCCTTC AAGGCCACGC TGCAGGAGGC CGTCGATGCC
GACTTGCTGC TGCACGTGGT CGATGCCTCC AATCCGCACT ACCCGGAGCA GATGGCCGAG
GTGCAGTCCG TGCTCCGCGA CATCGGCGCC GACACCGTCC CGCAGCTTCT GGTGTTCAAC
AAGCTCGATG CCCTTGAAAC TGCGCAGCAC CCGCTGCATC TGCAGGACGA CATGGAAATC
GACGGCGTGC GGGTTCCGCG CATCTTCCTC AGCGCCCGCA GCGGCGAGGG ACTGCCCCTG
CTGCGCGCCG AGCTGGCCCG CCGGTCGGGC TCCCTGGGCG ACGCGATGAC CCCAGAGGCC
GACACTGAAT TGCACGACAC CGCCAATTGA
 
Protein sequence
MSELNSRQEG AAVLVGVDFG LPHFDSELEE LGLLAQTAGL SPVARLVCKR KAPDAALFVG 
SGKAEEIKEL AAMHQASEVI FDQSLSPAQQ RNLERQLDVA VYDRTFLILE IFAQRARSHE
GKLQVELARL QYLSTRLVRR WSHLERQTGG AGVRGGPGEK QIELDRRMIS ESIKRTRERL
AKVQKQRGTQ RRQRERRETF NISLVGYTNA GKSSLFNALV KARAYAADQL FATLDTTTRN
LYLGDARRQV SISDTVGFIR DLPHGLVDAF KATLQEAVDA DLLLHVVDAS NPHYPEQMAE
VQSVLRDIGA DTVPQLLVFN KLDALETAQH PLHLQDDMEI DGVRVPRIFL SARSGEGLPL
LRAELARRSG SLGDAMTPEA DTELHDTAN