| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2166 |
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| Symbol | |
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| ID | 7973853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2313435 |
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| End bp | 2314019 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792754 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_002944067 |
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| Protein GI | 239815157 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.343346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTTT TCGTCCTACC CGCGTCCCTC CTGTTTGCCG TCGCAGTCCA AGCCGCCCCC
CAACAGGATC GAACCGATGA CGAACTGGCC CGGCTGCTGG CCGACAAGGG CATCATCGGC
CAACTCAGGC AGGTCCGCCA AACCGTCGCT GAACGAACCT CCGACCTGGT GGTGACCGCC
ATCGGCTTCC TCGGTGTTCC CTATCGCCGC GGCGGCAACT CGGCCGAATC CGGCTTCGAC
TGCAGCGGTT TCGTTCGCGC GATGTACAAC CAGACGCTCG GCCACGTGCT CCCGCGCCGC
GCCGAAGAAC AGGCCGCCGC CACCGAGAAG ATCGATCCCA GCCAGCTCAA GCCCGGCGAC
CTCGTCTTCT TCAACACCAT GCGCCGCGCC TTCAGCCATG TCGGCATCTA TGTGGGCGAA
GGCAAGTTCA TCCACTCGCC GCGCACCGGT GCCCAGGTCC GTGTGGAAGA CATGAACGGC
AGCTACTGGA GCCGCCGCTT CGACGGCGCA CGCCGCGTGC TCGGTGGCGC CCAGAACGAC
GAGATCAAGG CCGCGGCAAC TGCGGCAACC CACACCGGCA ACTGA
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| Protein sequence | MRFFVLPASL LFAVAVQAAP QQDRTDDELA RLLADKGIIG QLRQVRQTVA ERTSDLVVTA
IGFLGVPYRR GGNSAESGFD CSGFVRAMYN QTLGHVLPRR AEEQAAATEK IDPSQLKPGD
LVFFNTMRRA FSHVGIYVGE GKFIHSPRTG AQVRVEDMNG SYWSRRFDGA RRVLGGAQND
EIKAAATAAT HTGN
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