| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2156 |
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| Symbol | |
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| ID | 7973843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2298676 |
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| End bp | 2299407 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792744 |
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| Product | ribose-5-phosphate isomerase A |
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| Protein accession | YP_002944057 |
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| Protein GI | 239815147 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0120] Ribose 5-phosphate isomerase |
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| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCAC CCGTTTCCCC ATCTTCCGCC GACGGCGCCG CGAACGGCGC GGGCGCCATC
ACCCAGGACG AACTCAAGGC GCAGGTCGGC CGCGCCGCGC TGGCCTACGT GGCCAAGGGT
GAAATCGTCG GCGTGGGCAC GGGCTCCACG GTGAACAAGT TCATCGACGC GCTGGCCACC
ATCAAGGACC AGATCAAGGG CGCGGTGTCC AGCTCGGTGG CCTCGACCGA GCGCCTGCGC
GCCCTGGGCA TCCCGGTGTT CGACAGCAAC GAGGTCGACG AACTCGGCGT CTACATCGAC
GGCGCCGACG AGATCGACCC CCGCGGTTTC ATGGTGAAGG GCGGCGGCGC AGCGCTCACG
CGCGAGAAGA TCGTGGCGGC GCAGTCGCGG CGCTTCGTCT GCATCGCCGA TGCATCCAAG
CTGGTCGATA CACTCGGCGC CTTTCCGCTG CCGGTGGAGG TGATTCCGAT GGCGGCGCGC
CGCGTGATGC GGCAGTTCGA GGCCATGGGC GGCATCGCAC AGGTGCGCGA GAAGGACGGA
TTGCCGCTCG TGACCGACAA CGGCCAGCAC ATCGTCGACG TGACGGGGCT GCGGATCAGC
GATCCGCTCG CCTTCGAATC CGAGGTGAGC CAGTGGCCCG GCGTGGTCAC GGTCGGCGTG
TTTGCCCATC AGAAGGCCGA CGTGTGCCTG CTGGGCACGC CCGCGGGCGT GCGAACGATG
CAGTTCGACT GA
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| Protein sequence | MTAPVSPSSA DGAANGAGAI TQDELKAQVG RAALAYVAKG EIVGVGTGST VNKFIDALAT
IKDQIKGAVS SSVASTERLR ALGIPVFDSN EVDELGVYID GADEIDPRGF MVKGGGAALT
REKIVAAQSR RFVCIADASK LVDTLGAFPL PVEVIPMAAR RVMRQFEAMG GIAQVREKDG
LPLVTDNGQH IVDVTGLRIS DPLAFESEVS QWPGVVTVGV FAHQKADVCL LGTPAGVRTM
QFD
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