Gene Vapar_2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2152 
Symbol 
ID7973839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2295214 
End bp2296317 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content68% 
IMG OID644792740 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002944053 
Protein GI239815143 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.841388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAAC TCGATTGCGC CGTCATCGGC GGTGGTGTGG TGGGACTGGC AGTGGCGCGC 
GCCTTGGCGC TCGCGGGCCG GGAGGTGGTG GTGCTGGAAG CCGAAGGTGC CATTGGCACC
GGCACCAGTT CGCGCAACAG CGAGGTGATT CATGCGGGCA TCTACTACCC GCAGGGCTCG
CTCAAGGCCA GGCTTTGCGT GGAGGGCAAG GAGGCGCTTT ATGACTACGC AGCAGAGCGC
GGCGTGCCCC ACCGGCGCTG CGGCAAGCTG ATCGTTGCGA CTTCGGCCGA GCAGGTGGCC
CAGCTGGAAG TCATCCGTGC CAAGGCGGCC GCCAACGGTG TTGGCGACCT CGTGCTGCTG
ACTGCGCAGC AGGCCATGGC CCTGGAGCCG CAGCTCCACT GCGTGGCGGC ATTGCATTCG
CCGAGCACCG GCATCGTCGA CAGCCATGCC TTGATGCTGA GCCTGCTCGG CGACCTGGAG
AACGCGGGCG GCATGCTGGC GCTGAAATCG CCCATCGCCC GTGCGGAATG CGGCCGGGAC
GCTATCGTCC TGGTAGCTGA AGACGGAACG GCGCTGCGCT GCAATACCGT GGTCAATGCA
GCCGGCCTGC TCGCGCCCGA ACTGGCCCGC CGCTTCGAAG GCCTGCCGTC GGCGGCCGTG
CCCACCGCCT ACTTTGCCAA GGGCAGCTAT TTCACGCTGT CGGGCCGCGC GCCCTTCAGC
CGCCTCGTCT ATCCGGTGCC CGAACCCGGC GGATTAGGCG TGCACCTGAC GATCGACCTG
GGCGGGCAAG CCAAGTTCGG CCCCGACGTG CAATGGGTGC AATCGGCCGA CGACCTCGTG
GTGGACCCGG CGCGCGGCCA TGGCTTCTAC GCCGAGGTGC GCAAGTACTG GCCTGCCTTG
CCCGACGGAG CGCTGATTCC CGGCTACGCA GGCATGCGGC CCAAGATCTC GGGCCCGGAC
GAGCCGGCGC GCGACTTCAT GATCGACGGA CCCGAATCGC ACGGCGTGCA CGGGCTGGTC
AATCTCTTCG GCATCGAGTC GCCCGGGCTC ACGAGCAGCC TGGCGATCGG GCGGTACGTC
GAGCGCCTGC TCGCGGCGGG CTGA
 
Protein sequence
MDELDCAVIG GGVVGLAVAR ALALAGREVV VLEAEGAIGT GTSSRNSEVI HAGIYYPQGS 
LKARLCVEGK EALYDYAAER GVPHRRCGKL IVATSAEQVA QLEVIRAKAA ANGVGDLVLL
TAQQAMALEP QLHCVAALHS PSTGIVDSHA LMLSLLGDLE NAGGMLALKS PIARAECGRD
AIVLVAEDGT ALRCNTVVNA AGLLAPELAR RFEGLPSAAV PTAYFAKGSY FTLSGRAPFS
RLVYPVPEPG GLGVHLTIDL GGQAKFGPDV QWVQSADDLV VDPARGHGFY AEVRKYWPAL
PDGALIPGYA GMRPKISGPD EPARDFMIDG PESHGVHGLV NLFGIESPGL TSSLAIGRYV
ERLLAAG