Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2152 |
Symbol | |
ID | 7973839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2295214 |
End bp | 2296317 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644792740 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_002944053 |
Protein GI | 239815143 |
COG category | [R] General function prediction only |
COG ID | [COG0579] Predicted dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.841388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGAAC TCGATTGCGC CGTCATCGGC GGTGGTGTGG TGGGACTGGC AGTGGCGCGC GCCTTGGCGC TCGCGGGCCG GGAGGTGGTG GTGCTGGAAG CCGAAGGTGC CATTGGCACC GGCACCAGTT CGCGCAACAG CGAGGTGATT CATGCGGGCA TCTACTACCC GCAGGGCTCG CTCAAGGCCA GGCTTTGCGT GGAGGGCAAG GAGGCGCTTT ATGACTACGC AGCAGAGCGC GGCGTGCCCC ACCGGCGCTG CGGCAAGCTG ATCGTTGCGA CTTCGGCCGA GCAGGTGGCC CAGCTGGAAG TCATCCGTGC CAAGGCGGCC GCCAACGGTG TTGGCGACCT CGTGCTGCTG ACTGCGCAGC AGGCCATGGC CCTGGAGCCG CAGCTCCACT GCGTGGCGGC ATTGCATTCG CCGAGCACCG GCATCGTCGA CAGCCATGCC TTGATGCTGA GCCTGCTCGG CGACCTGGAG AACGCGGGCG GCATGCTGGC GCTGAAATCG CCCATCGCCC GTGCGGAATG CGGCCGGGAC GCTATCGTCC TGGTAGCTGA AGACGGAACG GCGCTGCGCT GCAATACCGT GGTCAATGCA GCCGGCCTGC TCGCGCCCGA ACTGGCCCGC CGCTTCGAAG GCCTGCCGTC GGCGGCCGTG CCCACCGCCT ACTTTGCCAA GGGCAGCTAT TTCACGCTGT CGGGCCGCGC GCCCTTCAGC CGCCTCGTCT ATCCGGTGCC CGAACCCGGC GGATTAGGCG TGCACCTGAC GATCGACCTG GGCGGGCAAG CCAAGTTCGG CCCCGACGTG CAATGGGTGC AATCGGCCGA CGACCTCGTG GTGGACCCGG CGCGCGGCCA TGGCTTCTAC GCCGAGGTGC GCAAGTACTG GCCTGCCTTG CCCGACGGAG CGCTGATTCC CGGCTACGCA GGCATGCGGC CCAAGATCTC GGGCCCGGAC GAGCCGGCGC GCGACTTCAT GATCGACGGA CCCGAATCGC ACGGCGTGCA CGGGCTGGTC AATCTCTTCG GCATCGAGTC GCCCGGGCTC ACGAGCAGCC TGGCGATCGG GCGGTACGTC GAGCGCCTGC TCGCGGCGGG CTGA
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Protein sequence | MDELDCAVIG GGVVGLAVAR ALALAGREVV VLEAEGAIGT GTSSRNSEVI HAGIYYPQGS LKARLCVEGK EALYDYAAER GVPHRRCGKL IVATSAEQVA QLEVIRAKAA ANGVGDLVLL TAQQAMALEP QLHCVAALHS PSTGIVDSHA LMLSLLGDLE NAGGMLALKS PIARAECGRD AIVLVAEDGT ALRCNTVVNA AGLLAPELAR RFEGLPSAAV PTAYFAKGSY FTLSGRAPFS RLVYPVPEPG GLGVHLTIDL GGQAKFGPDV QWVQSADDLV VDPARGHGFY AEVRKYWPAL PDGALIPGYA GMRPKISGPD EPARDFMIDG PESHGVHGLV NLFGIESPGL TSSLAIGRYV ERLLAAG
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