| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2144 |
|---|
| Symbol | |
|---|
| ID | 7973830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 2289838 |
|---|
| End bp | 2290161 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644792731 |
|---|
| Product | iron-sulfur cluster assembly protein IscA |
|---|
| Protein accession | YP_002944045 |
|---|
| Protein GI | 239815135 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0316] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR02011] iron-sulfur cluster assembly protein IscA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.253252 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTTA CGCTGACCGA AGCCGCTGCG CGCCACGTCA CCCGCTACCT CGGCAAACGG
GGCAAGGGCG TGGGCGTACG GCTGGGCGTG AAGACCACCG GCTGCTCGGG CCTGGCCTAC
AAGCTCGAGT ACGTGGACGA GTTCGCGCCT GAAGACGTGG TGTTCGAAGA CCACGGCGTG
AAGGTGCTGG TCGACCCCAA GAGCCTGGCC TACATCGACG GCACGCAGCT CGACTTCGTG
CGCGAAGGCC TGAACGAGGG CTTCAAGTTC ATCAATCCGA ACGAGCGGGA CCGCTGCGGC
TGCGGGGAAA GCTTTCGCAT TTGA
|
|---|
| Protein sequence | MAVTLTEAAA RHVTRYLGKR GKGVGVRLGV KTTGCSGLAY KLEYVDEFAP EDVVFEDHGV
KVLVDPKSLA YIDGTQLDFV REGLNEGFKF INPNERDRCG CGESFRI
|
|---|
| |