Gene Vapar_2134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2134 
Symbol 
ID7973820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp2279494 
End bp2279991 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content66% 
IMG OID644792721 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_002944035 
Protein GI239815125 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTCA GCTTGAACCC CGCGCTGGAC GCGCATGACA CCCGCATCCT GGCCGAACTG 
CAGGCCGATG CGCGGCTCAC CATGGCCGAG CTCGGCCGCC GCGTGCACCT GAGCCAGCCG 
GCCGTGACGG AGCGCGTGAA AAAGCTCGAG GCCGCGGGCG TGATCAGCGG CTACCGCGCG 
ACCGTGAACC TCGGCAAGCT TGGCTACGGC ATCCGCGCGA TCATCCGCGT GGGCCGCGCC 
GACTATGCGC GCGTGGTGGA ACTGGTGCAG CAGACGCCCG AATGCGTCAA TGCCTACAAC 
GTGACCGGCG ACGACAGCTG GATCCTGGAG ATCGCGGTCA TCGACGTGAG CCACCTCGAT 
GCGGTGGTCA CCAAGTTCTG CATCCTCACC GAAACCGCCA CCTCGATCAT CCTGAACCCG 
GCGCGCGAGC ACCAGCCGAT GCTGCCGCCT CAGCGTTCGG ACGTGAAGCC GCCTATCAGG 
AAGGTGCTCA ACGCGTAG
 
Protein sequence
MDFSLNPALD AHDTRILAEL QADARLTMAE LGRRVHLSQP AVTERVKKLE AAGVISGYRA 
TVNLGKLGYG IRAIIRVGRA DYARVVELVQ QTPECVNAYN VTGDDSWILE IAVIDVSHLD 
AVVTKFCILT ETATSIILNP AREHQPMLPP QRSDVKPPIR KVLNA