Gene Vapar_2129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2129 
Symbol 
ID7973815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2273282 
End bp2274334 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content70% 
IMG OID644792716 
Productarginine/ornithine transport system ATPase 
Protein accessionYP_002944030 
Protein GI239815120 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family 
TIGRFAM ID[TIGR00750] LAO/AO transport system ATPase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.50019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGAACA AGCCGGCGGC TGCACTGGAG CGCGCGATTG CCGAATCAGG CGGCATGGCG 
CAGCGCCGCG CGATTGCCAA GGCCATCACG CTGCTCGAAT CGACCCGCGC CGACCACCGC
GCGCAGGCCG ACGAACTGCT CACCGCGCTG CTGCCGCGCA CCGGCAATTC GTTTCGGCTC
GGCATCTCCG GCGTGCCGGG CGTCGGCAAG TCGACCTTCA TCGAGACGCT GGGCCTGCTG
CTGATCGGCA AGGGCCACCG CGTGGCGGTG CTCACCATCG ATCCTTCCTC CACTGTCTCG
GGCGGCTCCA TCCTCGGCGA CAAGACGCGC ATGGAGCGGC TCTCGGTGCA CGAGCGCGCC
TACATCCGCC CCAGCCCCTC GAGCGGCACG CTCGGCGGCG TGGCCGAGAA GACGCGCGAG
GCCATGCTGG TGTGCGAGGC CGCAGGCTAC GACATCGTGA TCGTCGAGAC CGTGGGCGTG
GGCCAGAGCG AAACCGCCGT GGCCGGCATG ACCGACATGT TCGTGCTGAT GCAGCTGCCC
AATGCGGGCG ACGACCTGCA GGCCATCAAG AAGGGCGTGA TGGAACTGGC CGACCTCGTC
GTCATCAACA AGGCCGACAT CGACAAGGAC GCCGCGACGC GTGCGCAGGC GCAGATCACC
TCGGCCCTGC GCCTCTTCGG CCACCAGGGC AACCCGGACC ACGCGCATGC GGCACACGAC
GCGCACAGCG GCGCCCAGGT GCGCTTCTGG CTGCCCCGGG TGCTGCAGCT CAGCGCGCTC
GCGGGCACGG GCGTCGACGC CTTCTGGGAC GCCGTCACGC AATTCAGGCA GCTGCAGAGC
GCCAACGGCA AGCTCGCCAG GCGCCGCGAG AAGCAGGCCA CCGCGTGGAT GTGGGAGCGC
ATCGACGCCG GGCTCAAGCA GGCCTTCAGG CAGCACGCGC AGGTGCGCGA ATTGCTGCCC
CAGCTCACCC GGCAGGTGGC GGAGGGCGCG CTGCCCGCAT CGACGGCGGC GCGCCAGCTG
CTTGCGGCGG CCGCCATCAC CGCCAGGCCA TGA
 
Protein sequence
MLNKPAAALE RAIAESGGMA QRRAIAKAIT LLESTRADHR AQADELLTAL LPRTGNSFRL 
GISGVPGVGK STFIETLGLL LIGKGHRVAV LTIDPSSTVS GGSILGDKTR MERLSVHERA
YIRPSPSSGT LGGVAEKTRE AMLVCEAAGY DIVIVETVGV GQSETAVAGM TDMFVLMQLP
NAGDDLQAIK KGVMELADLV VINKADIDKD AATRAQAQIT SALRLFGHQG NPDHAHAAHD
AHSGAQVRFW LPRVLQLSAL AGTGVDAFWD AVTQFRQLQS ANGKLARRRE KQATAWMWER
IDAGLKQAFR QHAQVRELLP QLTRQVAEGA LPASTAARQL LAAAAITARP