| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2123 |
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| Symbol | |
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| ID | 7973809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2266904 |
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| End bp | 2267785 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792710 |
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| Product | Taurine catabolism dioxygenase TauD/TfdA |
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| Protein accession | YP_002944024 |
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| Protein GI | 239815114 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.28342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCCC TCGAACTCAC CCCCCTGCAC CCGCTCTTCG CCGCCGAGGC GCGCGGCATC
GACATCAGGC AGCCGCTCTC GCCTTCCGAG GTGAAGCAGA TCAACGCGGC CATGAACCGC
TATGCCGTGC TGGTGTGGCG CGGACAGCCG CTCACGGGCC AGCAGCAGAT CGATTTCGCG
AAGGCGTTCG GCCCGCTCGA CCTGGGCCTG AAGAAGGTCT TCAAGCGCCC CGAGCGGCTG
GAGGACGAAC GGCTCATCGA CATCTCCAAC GTCGATGCAG AAGGCAAGGT GGCGCGCCGC
GATTCGCCCA AGAACCTGTC GAACTTTGCC AACCAGCTCT GGCACAGCGA CAGCTCCTTC
CAGAACCCGC GCGCCGCCTA TTCGATGCTG CATGCACTGG TGCTGCCGAG CTGGGGCGGC
AACACCGAGT TCGCGGAACT TCGCGCCGCC TACGACGCCC TGCCCGAGCG CACCCGCTCG
GAGATCGAGG GCCTGCGCGC CGAGCACTAT GCGCTGCACA CCCGCATCCT GCTGGGCGAC
GAGGCCTACA CCGACGACCA GAAGAAAGCC ATTCCACCCG CCGTGTGGCC GCTGGCGCAG
ACGCATCCGG GCTCGGGGCG CAAGCTGCTG TTCGTGGGCG TGCATGCACG CGAGATCATC
GGCTGGCCGG TGGCCGAGGG CCGCATGTTC CTGTCCGATC TGCTCGAGCA TGCAACGCGC
CGCGAATTCG TCTACACGCA CGAATGGCAG GTGGGCGACC TCGTGATGTG GGACAACCGC
AGCACCCTGC ACCGCGGCCG GCGCTACGAC ATCGGCGAGC GCCGCGAGCT GCGCCGCACC
ACCATCGAGG ACGTGCCCGA GGCCACGCTG ATGGCAGCCT GA
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| Protein sequence | MSSLELTPLH PLFAAEARGI DIRQPLSPSE VKQINAAMNR YAVLVWRGQP LTGQQQIDFA
KAFGPLDLGL KKVFKRPERL EDERLIDISN VDAEGKVARR DSPKNLSNFA NQLWHSDSSF
QNPRAAYSML HALVLPSWGG NTEFAELRAA YDALPERTRS EIEGLRAEHY ALHTRILLGD
EAYTDDQKKA IPPAVWPLAQ THPGSGRKLL FVGVHAREII GWPVAEGRMF LSDLLEHATR
REFVYTHEWQ VGDLVMWDNR STLHRGRRYD IGERRELRRT TIEDVPEATL MAA
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