| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2106 |
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| Symbol | |
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| ID | 7972508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2248609 |
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| End bp | 2249811 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644792695 |
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| Product | aminotransferase class I and II |
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| Protein accession | YP_002944009 |
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| Protein GI | 239815099 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCCA ATTTTGATCA ACTGATCTCG CGCCAGGGCA CCAATGCCCT TGCGGAGGAT
GGGTACGAGA AGTATCTATT TGGAGCCGAA CCGTTGGTGC CGCCTCTACA GGTGCCCTCG
ACGGAACTGG TGTCCATGTG GGTTGCTGAC ATGCAGTTCG CCGCACCCGA GGCCGCCATC
GGCGCCATGC GTGAGCGACT GGCGCATCCC ATTTTCGGAT ACACGATGAA CTTCGACGAC
CAGTTGTACG ACGCCTTCAG TGCGTGGTGT GACCGGCGCT ACGGTTGGCG TTTCGATCGT
GAGCAGATGC AGATTTCCCT GGGAGTGATC CCCGCGCTTT TCGGTCTCGT CGAATACGTG
TGCGCCCCCG GTGACAAGGT GCTCAGCCTG ACGCCGTCGT ACGGCTACTT CAAGCATGCA
GTCGTCCAAC GGGACAGGGT GTTCGAAACC TCGCCCTTGC GCAAAACGGA CGACGGGGAC
TACGAGATTG ACTTCGAGGA TTTCGAGCGC AAGGTTCGAG ACCCGGCCGT GAAGCTGTTT
TTCCTCTGTC ATCCCCATAA CCCGACCGGA CGCGTCTGGA CCGAGGATGA GCTGCGCCGC
ATGGCCGAGC TGTGCCTGTC CAATGGCGTC AAGATCGTGT CTGACGAGAT CCACTGCGAC
CTGACCCGCA CCGGGGTGAC GCATGTGCCA CTGGCCAAGC TATTCCCGAG CAGCAAGGAC
ATCATCACCT GCATGGCGGT GAGCAAGACG TTCAACCTGG CCGGGTTGAT GGTCGCCACG
GTAGTCATCC CCGATCCGGA ACTTCGAGCG ACATGGAAGC GAAGGCACTA TCCGTTCGTC
AATCCGCTAA GCCTCGCTGC GGCCGTCGGT GCTTATAGAG ACGGCGAAGC CTGGCTTGAC
GCGCTCAGGA AGTATCTTGA CGACAACTTT GCGTTCATGC ATCGATACCT CGCGCTTTGG
CTACCCAAGG CACGGTTCCA GATTCCGCAG GCCACATATC TGGCATGGGT GGACTTGAGT
GCCTATTTCG ATGACTCCGT CAATCTGACC AGGTTCTTTC TCGAAAAGGC TGGCCTGATC
TTGGAGGGAG GAGAAATGTT TGTGGCGAAC GGGGCTCAAT GCATTCGATT GAATCTTGCA
TGCCCACGAA TACAAGCAGA AGAGGCTTTG AAAAAGCTGG TGGCTGCGAT CGCGTCGCAT
TAG
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| Protein sequence | MTSNFDQLIS RQGTNALAED GYEKYLFGAE PLVPPLQVPS TELVSMWVAD MQFAAPEAAI
GAMRERLAHP IFGYTMNFDD QLYDAFSAWC DRRYGWRFDR EQMQISLGVI PALFGLVEYV
CAPGDKVLSL TPSYGYFKHA VVQRDRVFET SPLRKTDDGD YEIDFEDFER KVRDPAVKLF
FLCHPHNPTG RVWTEDELRR MAELCLSNGV KIVSDEIHCD LTRTGVTHVP LAKLFPSSKD
IITCMAVSKT FNLAGLMVAT VVIPDPELRA TWKRRHYPFV NPLSLAAAVG AYRDGEAWLD
ALRKYLDDNF AFMHRYLALW LPKARFQIPQ ATYLAWVDLS AYFDDSVNLT RFFLEKAGLI
LEGGEMFVAN GAQCIRLNLA CPRIQAEEAL KKLVAAIASH
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