| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2105 |
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| Symbol | |
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| ID | 7972507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2247564 |
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| End bp | 2248493 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644792694 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002944008 |
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| Protein GI | 239815098 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTT TGATACAGCA GATCATCAAC GGTCTGGTCC TCGGCAGCAT GTATGCCTTG
ATAGCCTTGG GCTACACCAT GGTGTACGGC ATCATCAATC TGATCAATTT TGCGCACGGT
GAAGTGCTGA TGGTAGGGGC GCTCACGAGC TGGACCATCA TCGGCCTCAT GAAGGAATCA
ATGCCCGGTA CGCCCGGCTG GTTGATCCTC ATCATCGCGT TGATCATTGC CTGCGTGGTG
GCTGCCACGC TCAACTTCGT GATCGAGAAG GTCGCTTACC GGCCGCTTCG CAACAGCCCC
AAGCTGGCGC CCCTCATCAC GGCTATCGGC ATGTCGATCC TGCTGCAGAC GCTGGCGATG
ATCATCTGGA AGCCCACCAA CAAGGCTTAT CCCAACCTGC TGTCGACCAC GCCCATCGAA
GTGGCTGGCG CAGTGATCTC GCCCACTCAG GTCATGATCC TGAGCGTCAC GGCGTTCTCG
CTCGTGGTGC TGATGTGGCT GGTCAACTAC ACCAAGCTCG GCCGCGCCAT GCGCGCCACC
GCCGAGAACC CGCGCGTCGC GGCGCTCATG GGCATCAGGC CCGACATGGT CATTTCGGCC
ACCTTCATCA TCGGCGCCGT GCTTGCGGCC ATCGCAGGCG TCATGTACGC CTCCAACTAC
GGCATCGCGC AGCACGCGAT GGGCTTCCTG CCCGGCCTCA AGGCGTTCAC CGCGGCGGTG
TTCGGCGGCA TCGGCAACCT GGCCGGCGCC GTGGTCGGCG GCATCCTGCT CGGGCTGATC
GAAGCCATCG GCTCCGGCTA TATCGGTTCG CTGACCGGCG GCGTGCTGGG AAGCAACTAC
AGCGACATCT TCGCGTTCAT CGTGCTGATC GTCATGCTCA CGCTGCGGCC TTCAGGCCTG
CTTGGCGAGC GCGTGGCGGA TCGCGCCTGA
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| Protein sequence | MDILIQQIIN GLVLGSMYAL IALGYTMVYG IINLINFAHG EVLMVGALTS WTIIGLMKES
MPGTPGWLIL IIALIIACVV AATLNFVIEK VAYRPLRNSP KLAPLITAIG MSILLQTLAM
IIWKPTNKAY PNLLSTTPIE VAGAVISPTQ VMILSVTAFS LVVLMWLVNY TKLGRAMRAT
AENPRVAALM GIRPDMVISA TFIIGAVLAA IAGVMYASNY GIAQHAMGFL PGLKAFTAAV
FGGIGNLAGA VVGGILLGLI EAIGSGYIGS LTGGVLGSNY SDIFAFIVLI VMLTLRPSGL
LGERVADRA
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