| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2102 |
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| Symbol | |
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| ID | 7972504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2244762 |
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| End bp | 2245559 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792691 |
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| Product | ABC transporter related |
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| Protein accession | YP_002944005 |
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| Protein GI | 239815095 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGA CGATGACGAG CGCAGAAGAA ACAACGACAG CAACGGCAAC TGCAACCCCG
CCGAAGACCG CGGCCAATGC CACTGGCAAG ACGCTGCTCA AGGTCAGCGG GCTGAAGGTC
GGCTACGGCG GCATCCAGGC CGTGAAGGGC GTGGATTTCG AGGTCCATGA GGGCGAACTG
GTGTCGCTCA TCGGCTCCAA CGGCGCCGGC AAGACGACCA CCATGAAGGC GATCACTGGC
ACCTTGCCGG CGGGTGCCGG CACCATCGAA TTCCTGGGCC GCAACATCAA GGGCCGCGGC
GCGTGGGACC TGGTGGGCGA GGGCCTGGTG ATGGTGCCCG AAGGCCGCGG CGTCTTCACG
CGCATGACCA TCACCGAGAA CCTGCAAATC GGCGCCTACA TCCGCAAGGA CAAGGCCGAG
ATCGCCAGCG ACATGGAGCG GGTGTTCGTG ACCTTCCCGC GCCTGCGCGA GCGCAAGGAC
CAGCTCGCCG GCACCATGTC GGGCGGTGAA CAGCAGATGC TGGCCATGGG CCGCGCGCTC
ATGGCGCGCC CCAAGGTGCT GCTGCTCGAC GAGCCCACCA TGGGCCTGTC GCCCATCATG
TGCGACAAGA TCTTCGAAGT GGTGCAGACC GTGGCCGCGC AGGGCGTGAC CATCCTGCTG
GTGGAGCAGA ACGCCAATCG CGCACTGCAG CTGGCCGACC GCGGCTACGT GATGGAGTCG
GGGCTCATCA CGATGACCGG CGACGCCAAG GAATTGCTGC GCGACCCGCG CGTGCGGGCC
GCTTACCTGG GCGAGTAG
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| Protein sequence | MTTTMTSAEE TTTATATATP PKTAANATGK TLLKVSGLKV GYGGIQAVKG VDFEVHEGEL
VSLIGSNGAG KTTTMKAITG TLPAGAGTIE FLGRNIKGRG AWDLVGEGLV MVPEGRGVFT
RMTITENLQI GAYIRKDKAE IASDMERVFV TFPRLRERKD QLAGTMSGGE QQMLAMGRAL
MARPKVLLLD EPTMGLSPIM CDKIFEVVQT VAAQGVTILL VEQNANRALQ LADRGYVMES
GLITMTGDAK ELLRDPRVRA AYLGE
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