| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2045 |
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| Symbol | |
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| ID | 7972447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2189880 |
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| End bp | 2190773 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644792642 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002943956 |
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| Protein GI | 239815046 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAATT TCAAGCGGCT CGACCTCAAC CTGCTGCTCA CGCTCGACGT GCTGCTGGCC
GAACGCAGCG TGACCCGTGC CGCCGAGCGC CTGAACCTCT CGCAGCCCTC GGTGAGCGTG
CAGCTCGCCC GGCTGCGCGA GGTGTTCAAC GATCCGCTGC TGGTGCCCGC GCAGCGCGGC
ATGCGGCCCA CCGCGCGCGC CGACGAACTG CGCGAGCCGC TGCGCGAAGC GCTCGAATCA
TTGGGCCGCG CGGTGGCGCC CACCAAACCC TTCGACCCCG CCGAGGCGAC CACCACCTGG
CGCGTGGCCG CGGCCGACTA TGCCGAGTCG GCGATCCTGC TGCCGGCGCT CGCGGGTCTT
CGCGCAGCCG CGCCCCACAC GCGGCTGGCC GTGGTGGAGG CGGTGCCCTC GCGCATGGCG
CGGCAGCTGG AGCAGGGGGA GATCGACCTG TTCTTCCACA CCAGCGTGGG CGCACCGCCC
GGGCTGCACC GGCGCGTGCT GTTCAACGAG CGCTACGTGC TCGCCGGGCG CAGCGGCCAT
CCGCGGCTGA AGCGCCGGCC GACGCTGGCG CAGTTCTGTG CGCTGGAGCA CGTGGTGGTG
TCGCTCGGCG GCGGCGGCTT TGCCGGGCCC ACGGACGATG CGCTGGCGCA GCAGGGGCTC
GCGCGGCGCG TGGCGCTTTC GGTGCCGCAT TTCCTTTTCA TGATGTCGGT ACTGGCCTGC
ACCGACATGG TCGCGATGCT GCCCGAGCGG CTCGCGCGCG GCGCGCCGGG GCTGCGCGTG
GTGGAGGCGC CGCTGGAGGT GCCGGGCTAC GAGATGGCGA TGCTGTGGCA CGAGCGGCGG
CATCGCGATC CGGCGCACAA GTGGCTGCGG GAGCGGATTG CGGCGAGCCT GTAG
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| Protein sequence | MDNFKRLDLN LLLTLDVLLA ERSVTRAAER LNLSQPSVSV QLARLREVFN DPLLVPAQRG
MRPTARADEL REPLREALES LGRAVAPTKP FDPAEATTTW RVAAADYAES AILLPALAGL
RAAAPHTRLA VVEAVPSRMA RQLEQGEIDL FFHTSVGAPP GLHRRVLFNE RYVLAGRSGH
PRLKRRPTLA QFCALEHVVV SLGGGGFAGP TDDALAQQGL ARRVALSVPH FLFMMSVLAC
TDMVAMLPER LARGAPGLRV VEAPLEVPGY EMAMLWHERR HRDPAHKWLR ERIAASL
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