| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2033 |
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| Symbol | |
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| ID | 7972435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2176997 |
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| End bp | 2178694 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792630 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_002943944 |
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| Protein GI | 239815034 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCACA GCGTTTCCCT GATCAACACG ATTGCCGCCG GCCTGGGGCT GGCGCTCGTG
CTGGGTTTCC TGGCGCTGCG GCTGCGGCTG CCGGCGCTGG TGGGCTACCT GCTCGCGGGC
GTGATCATCG GGCCCTTCAC GCCGGGCTTC GTGGCCGATG CGGGCATTGC GGCGCAGCTG
GCCGAGATCG GCGTGATGCT GCTGATGTTC GGCGTGGGCC TGCATTTTTC GCTCGACGAC
CTGCTGGCGG TGCGCAAGAT CGCGCTGCCG GGCGCACTCG CGCAGATCGC GGTGGCCACG
CTGCTGGGCG GTGCGCTGGC GCTCTGGTGG GGCTGGTCAT GGGGCGAGGC GCTGGTCTTC
GGCCTGGCGC TGTCGGTGGC AAGCACGGTC GTGCTGCTGC GCGCGCTCGA GAGCCTGGGC
ATTCTCGATT CGTTCACCGG GCGCATCGCG GTCGGCTGGC TGGTGGTCGA GGACCTGGCC
ATGGTGCTGG TCCTGGTGCT GATGCCGCCG CTCGCGGGGG CGCTGGGCGG CCAGGCGGGC
GATTCGGCCA ACGCCGATCC GCTGTGGCAG ACGCTCGGCG TCACGCTGCT GCAGGTGGGC
GGGTTCGTGG CGCTGATGCT GGTGGTGGGG CGGCGCGCGT TTCCTTGGAT TCTCTGGCAG
GTCACGCGCA CCGGCTCGCG CGAGCTGTTC ACGCTGTGCG TGATCGCGGC CGCAGTCAGC
ATCGCCTTTG CGTCGGCGGC GCTGTTCGGC GTGTCGTTCG CGCTGGGCGC TTTCTTCGCG
GGCATGGTGA TGCGCGAATC CGAATTCAGC CACCGCGCGG CGCAGGAGTC GCTGCCGCTG
CGCGATGCCT TCGCGGTGCT GTTCTTCGTG TCGGTGGGCA TGCTCTTCGA TCCCTCGGTG
CTCGTCGATC GGCCGCTGCA GGTGCTGGCG GTGGTGGGCG TGATCGTGCT GGGCAAGTCG
CTGGCCGCCT GCGCGCTGGT GCTGGCGTTC CGCTATCCGC TGGGCACGGC GCTCACCGTG
AGCGCGAGCC TTGCGCAGAT CGGGGAGTTC TCGTTCATTC TTGCGGGGCT CGGCGTCTCG
CTCGGCCTGC TGCCGGTGGA AGGGCAGAGC CTGATCCTGG CCGGCGCGCT GATTTCCATT
GCCACCAATC CGCTGTGGTT CAGCCTGGTC GCACCGATCG AGAAATGGCT GCACGGCCGC
TTCCCGGCGG CGCGCAGCCT CGAATCGCAC GACCATCCGC TGGCCGAACT GCCGACCACC
ACCGAAGCCC GTTACCTGTC CCGCCAGGTG GTGCTGGTGG GCTATGGCCG CGTCGGGCGC
CGCATCGCGT CCGAGCTGGA GGCGCACGAC ATTCCCTACG TGGTGGCGGA GCAGAACCGC
GAGCTGGTCG AGAAGCTGCG CGAGGCCGGC GTGGCGGCCG TCTGGGGCGA CGCGGCCGAT
CCGGCCGTGC TGATCCAGGC GCACATCGCG CGTGCCCGCG TGCTGGTGGT GGCCATCCCG
GACGCCATGA ACGTGCGGCA GATGATGGAA ACCGCCCGCA CCCTCAATCC GGCCATCGAA
ACCGTGATCC GCAGCCACAA CGAGGAAGAA GCCGGGCTGC TGACCCGCGA GATGGCCGCC
ACGGTCTTCC TGGGCGAACA GGAACTCGCG CAGGCCATGG CGCGCGACGT GGTGCGGCGC
GCAGCGGCGG CCGCCTGA
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| Protein sequence | MPHSVSLINT IAAGLGLALV LGFLALRLRL PALVGYLLAG VIIGPFTPGF VADAGIAAQL
AEIGVMLLMF GVGLHFSLDD LLAVRKIALP GALAQIAVAT LLGGALALWW GWSWGEALVF
GLALSVASTV VLLRALESLG ILDSFTGRIA VGWLVVEDLA MVLVLVLMPP LAGALGGQAG
DSANADPLWQ TLGVTLLQVG GFVALMLVVG RRAFPWILWQ VTRTGSRELF TLCVIAAAVS
IAFASAALFG VSFALGAFFA GMVMRESEFS HRAAQESLPL RDAFAVLFFV SVGMLFDPSV
LVDRPLQVLA VVGVIVLGKS LAACALVLAF RYPLGTALTV SASLAQIGEF SFILAGLGVS
LGLLPVEGQS LILAGALISI ATNPLWFSLV APIEKWLHGR FPAARSLESH DHPLAELPTT
TEARYLSRQV VLVGYGRVGR RIASELEAHD IPYVVAEQNR ELVEKLREAG VAAVWGDAAD
PAVLIQAHIA RARVLVVAIP DAMNVRQMME TARTLNPAIE TVIRSHNEEE AGLLTREMAA
TVFLGEQELA QAMARDVVRR AAAAA
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