Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1994 |
Symbol | |
ID | 7969787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2142182 |
End bp | 2142580 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644792592 |
Product | putative cytochrome c |
Protein accession | YP_002943906 |
Protein GI | 239814996 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0572463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGCCG CCCCGTCATG CCCTGCCGTG TGCCCGCTCG CCCTGCTGGT GCTGGTGGCG CTCGCGGCCG GATGCACGCC GGGAGAGAGC AGCCCCATCT TCGAGCGCGC GCCGCCCGCG CAGCGCGAGC GCGGAAGGCA GCTGCTGGCG CAATACCAGT GCGGAAGCTG CCACACCATC CCCGACGTGC AGGCCGCGCG CGGCCGCACC GGCCCCACGC TCGCCGCCTT CGGCAAGCGC AGCTACATTG CCGGCCAGGT GCCGAACGGC CCCGACGCCC TGGTGCGCTG GATCGTGGCG CCGGCCGCCG TGGTGCCGGG CACCACCATG CCTGCAATGG GTGTGTCGCC CCAGGACGCG CGCGACATGG CGGCCTACCT GCTCGCGCTC GAGAAATGA
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Protein sequence | MVAAPSCPAV CPLALLVLVA LAAGCTPGES SPIFERAPPA QRERGRQLLA QYQCGSCHTI PDVQAARGRT GPTLAAFGKR SYIAGQVPNG PDALVRWIVA PAAVVPGTTM PAMGVSPQDA RDMAAYLLAL EK
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