Gene Vapar_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1994 
Symbol 
ID7969787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2142182 
End bp2142580 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content74% 
IMG OID644792592 
Productputative cytochrome c 
Protein accessionYP_002943906 
Protein GI239814996 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0572463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGCCG CCCCGTCATG CCCTGCCGTG TGCCCGCTCG CCCTGCTGGT GCTGGTGGCG 
CTCGCGGCCG GATGCACGCC GGGAGAGAGC AGCCCCATCT TCGAGCGCGC GCCGCCCGCG
CAGCGCGAGC GCGGAAGGCA GCTGCTGGCG CAATACCAGT GCGGAAGCTG CCACACCATC
CCCGACGTGC AGGCCGCGCG CGGCCGCACC GGCCCCACGC TCGCCGCCTT CGGCAAGCGC
AGCTACATTG CCGGCCAGGT GCCGAACGGC CCCGACGCCC TGGTGCGCTG GATCGTGGCG
CCGGCCGCCG TGGTGCCGGG CACCACCATG CCTGCAATGG GTGTGTCGCC CCAGGACGCG
CGCGACATGG CGGCCTACCT GCTCGCGCTC GAGAAATGA
 
Protein sequence
MVAAPSCPAV CPLALLVLVA LAAGCTPGES SPIFERAPPA QRERGRQLLA QYQCGSCHTI 
PDVQAARGRT GPTLAAFGKR SYIAGQVPNG PDALVRWIVA PAAVVPGTTM PAMGVSPQDA
RDMAAYLLAL EK