Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1993 |
Symbol | |
ID | 7969786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2141241 |
End bp | 2142185 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644792591 |
Product | cytochrome c oxidase, subunit II |
Protein accession | YP_002943905 |
Protein GI | 239814995 |
COG category | [C] Energy production and conversion |
COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0975891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCGG CGAGCGAGGG CGCACCCCAA TCCGCCCTGC GGGCCGCCGG CCCCGTCGCG CAATCGCTGC TCGAAGTGAG CGGCGTGCTG GCGGTGGGCG GCGCGGTGAT CTTCGCCGGC GTGATGCTGC TGCTCGCACT GGCCGTTCGC CACCGCGGTG GCGGCCGGGT GAACACGCGC TGGTGGCTGC TCGGCGGCGG CCTTGCTTTT CCGACGGTGG TGCTCTCGGC GCTCTTCGCC CACAGCGAAT TCCACCGGCC GCCGTGGCGG CCCATTCCAC CGCCCGGCGC GCTGATCGTC GGCGTCACGG GCCACATGTG GTGGTGGGAG GTGCGCTACC GCGACCCCGC CAGCGGCGCC GAGGTGGTCA CGGCGAACGA GATCCGCATT CCGGTCGGCC GGCCGGTCTA TTTCGGCCTT GGCAGCGCCG ACGTGATCCA CAGTTTCTGG GTGCCCTCGC TCGGCGGCAA GATGGACATG CTGCCCGGCC GCGTGCAGCA CCTGCTGCTG CAGGCCGGCC GGCCCGGCAC CTGGCGCGGG CAGTGCGCCG AATACTGCGG CGAGCAGCAT GCGCGCATGG CGCTGCACGT GGTGGCCGAA GAGCCCGCGG CTTTCGATGC ATGGCTTGCG GGGCAGGCAC GGCCGGCGGC CGCGGCTTCG CGCGAGCTCG AACGCGGCCG CGAGGCCTTC CTCGCGCACC GCTGCAACGC CTGCCACACC GTGCGCGGCG TCAGCGAGCA GAGCCGCCTC GGGCCCGACC TCACGCACGT GGGCAGCCGG CTGCACCTGG GCGCCGGCAC CGCGCCCAAC GATGCCGCGC AGCTCGCCGC CTGGGTGGCC CACACGCAGC AGCTGAAGCC GGGCGCGCGC ATGCCCTCCT CCGGCGAGCG CATCGGCGAG GCCGACCTGC AATCCATCGC GGCCTGGCTC GCGCAACTGA AATGA
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Protein sequence | MNAASEGAPQ SALRAAGPVA QSLLEVSGVL AVGGAVIFAG VMLLLALAVR HRGGGRVNTR WWLLGGGLAF PTVVLSALFA HSEFHRPPWR PIPPPGALIV GVTGHMWWWE VRYRDPASGA EVVTANEIRI PVGRPVYFGL GSADVIHSFW VPSLGGKMDM LPGRVQHLLL QAGRPGTWRG QCAEYCGEQH ARMALHVVAE EPAAFDAWLA GQARPAAAAS RELERGREAF LAHRCNACHT VRGVSEQSRL GPDLTHVGSR LHLGAGTAPN DAAQLAAWVA HTQQLKPGAR MPSSGERIGE ADLQSIAAWL AQLK
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