Gene Vapar_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1909 
Symbol 
ID7971088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2041778 
End bp2042638 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content68% 
IMG OID644792509 
ProductABC transporter related 
Protein accessionYP_002943823 
Protein GI239814913 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCCC TCCTTGCGAA CCCCTCCAAC GAACTCGACA TCCGCGGCCT CGGCAAGCGC 
TATGCCAGCA CGCAGGCCAG CGGCGGCGAA CTGCAGGTGC TCGAAGGCAT CGACCTGCAC
ATTCCGGCCG GCCGCTTCGT GAGCATCGTC GGCACCAGCG GCTGCGGCAA GTCCACGCTG
CTGCGGCTCA TCCTCGGCTT GGACGCGCAG TACGAGGGCC GAATCCTGCT CGACGGTGAA
CCGATCTCGG GCCCCGGCCG CGAGCGCGGC ATCGTGTTCC AGGACCACCG CCTCTTTCCC
TGGCTCACGG TGGAGCAGAA CATCGCGGTG GGCCTGCGCA ACGCACCCTT CAGCGCCAAG
GAAAAGCGTG AGCTGGTGGC CGAGCACGTC GCGCTGGTCG GGCTCGAGGG CTTCGAAAAA
TCGTGGCCGC ACCAGATCTC CGGCGGCATG GCGCAGCGCG TGGCGATTGC GCGCGGCCTG
GTGAACCGCC CGCGCGTGCT GCTGCTCGAC GAACCCTTCG GCGCGCTCGA TGCACTCACA
CGCTCGCGGC TGCAGAACGA GCTTCAGCGC ATCTGGCAGA AAGAGCGCAT CACCATGCTG
CTGGTGACCC ACGATGTCGA GGAAGCCGTC TTCCTGGGCG ATCGTGTGGT GGTGATGCAG
CCCTCGCCCG GCCGCATCCG GCGCACCGTC GAGGTCGACC TGCCGCACCC GCGCAACCGC
AGCGACCCGG CATTCATTGC CTTGCGCGAC GACGTGCTCA GCGACTTCCT CGATGCCGAT
ACCGACCGCA CACCGATCGC AGCACCGCAA CCTGAAGCGG TCGCAACCGG GCTGCCGCAG
CGCCTGCAGC TGGCGTGGTG A
 
Protein sequence
MTSLLANPSN ELDIRGLGKR YASTQASGGE LQVLEGIDLH IPAGRFVSIV GTSGCGKSTL 
LRLILGLDAQ YEGRILLDGE PISGPGRERG IVFQDHRLFP WLTVEQNIAV GLRNAPFSAK
EKRELVAEHV ALVGLEGFEK SWPHQISGGM AQRVAIARGL VNRPRVLLLD EPFGALDALT
RSRLQNELQR IWQKERITML LVTHDVEEAV FLGDRVVVMQ PSPGRIRRTV EVDLPHPRNR
SDPAFIALRD DVLSDFLDAD TDRTPIAAPQ PEAVATGLPQ RLQLAW