Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1909 |
Symbol | |
ID | 7971088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2041778 |
End bp | 2042638 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644792509 |
Product | ABC transporter related |
Protein accession | YP_002943823 |
Protein GI | 239814913 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTCCC TCCTTGCGAA CCCCTCCAAC GAACTCGACA TCCGCGGCCT CGGCAAGCGC TATGCCAGCA CGCAGGCCAG CGGCGGCGAA CTGCAGGTGC TCGAAGGCAT CGACCTGCAC ATTCCGGCCG GCCGCTTCGT GAGCATCGTC GGCACCAGCG GCTGCGGCAA GTCCACGCTG CTGCGGCTCA TCCTCGGCTT GGACGCGCAG TACGAGGGCC GAATCCTGCT CGACGGTGAA CCGATCTCGG GCCCCGGCCG CGAGCGCGGC ATCGTGTTCC AGGACCACCG CCTCTTTCCC TGGCTCACGG TGGAGCAGAA CATCGCGGTG GGCCTGCGCA ACGCACCCTT CAGCGCCAAG GAAAAGCGTG AGCTGGTGGC CGAGCACGTC GCGCTGGTCG GGCTCGAGGG CTTCGAAAAA TCGTGGCCGC ACCAGATCTC CGGCGGCATG GCGCAGCGCG TGGCGATTGC GCGCGGCCTG GTGAACCGCC CGCGCGTGCT GCTGCTCGAC GAACCCTTCG GCGCGCTCGA TGCACTCACA CGCTCGCGGC TGCAGAACGA GCTTCAGCGC ATCTGGCAGA AAGAGCGCAT CACCATGCTG CTGGTGACCC ACGATGTCGA GGAAGCCGTC TTCCTGGGCG ATCGTGTGGT GGTGATGCAG CCCTCGCCCG GCCGCATCCG GCGCACCGTC GAGGTCGACC TGCCGCACCC GCGCAACCGC AGCGACCCGG CATTCATTGC CTTGCGCGAC GACGTGCTCA GCGACTTCCT CGATGCCGAT ACCGACCGCA CACCGATCGC AGCACCGCAA CCTGAAGCGG TCGCAACCGG GCTGCCGCAG CGCCTGCAGC TGGCGTGGTG A
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Protein sequence | MTSLLANPSN ELDIRGLGKR YASTQASGGE LQVLEGIDLH IPAGRFVSIV GTSGCGKSTL LRLILGLDAQ YEGRILLDGE PISGPGRERG IVFQDHRLFP WLTVEQNIAV GLRNAPFSAK EKRELVAEHV ALVGLEGFEK SWPHQISGGM AQRVAIARGL VNRPRVLLLD EPFGALDALT RSRLQNELQR IWQKERITML LVTHDVEEAV FLGDRVVVMQ PSPGRIRRTV EVDLPHPRNR SDPAFIALRD DVLSDFLDAD TDRTPIAAPQ PEAVATGLPQ RLQLAW
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