| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1862 |
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| Symbol | |
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| ID | 7970879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1993919 |
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| End bp | 1994692 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644792463 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002943778 |
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| Protein GI | 239814868 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.116723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCGCA AGCTCCTGCT TTCTCCGGCC CTGCGCCCGT TCCTCTTGAT CCTGCTGCTG
CTGGTGCTGT GGGACGTGGC GATCCGGCTC TTCAGGATTC CGGCCTACCT GATTCCACCG
CCGTGGGAAG TGGTGAAGCA GCTCGTGGCC GAATGGCCGC GCCTGTTGGC CGAGAGCTGG
AAGACCACGC TCGCCACGCT CGGCGGCTTC GGCCTGACGA TCTTGATCGG CATACCGATT
GCGATGGTCA TCGCCTACTC GCGGCTGGTC GAGTCGTACG TGTACCCGCT GCTGGTGTTC
TCGCAGAGCA TTCCCAAGGT GGCGATTGCG CCTCTCTTCG TGGTGTGGTT CGGCTTCGGC
ATCTTTCCGA AGGTGATCAG TGCGTTCCTG CTGGGTTTCT TTCCGGTGGT GGTGTCGACG
GTGATGGGCT TCAAGTCGGT CGAGCCCGAC ATGCTCGACC TGGCCCGCTC GATGGGCGCG
AGCCGGCTGC AGACCTTCTT CAAGATCAGC CTGCCGCAGG CCATGCCCGC GATCTTCAGC
GGCCTGAAGG TGTCGGTGAC GCTGGCCGTG GTGGGTGCGG TGGTCGGCGA GTTCGTCGGC
TCCAACTCGG GCATCGGCTA CGTGCTGCAG GTGGCCAACG GCAACTTCGA CCTGCCCCTG
ATGTTTGCCG CGCTCGTGGT GCTGTCGAGC ATCGGCGTGA TTCTTTTCGT CGCGGTCGAC
ATCGTCGAGC GCGTGATGAT TCCGTGGCAT GCCTCGCAGC GCCACGCGAA CTGA
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| Protein sequence | MLRKLLLSPA LRPFLLILLL LVLWDVAIRL FRIPAYLIPP PWEVVKQLVA EWPRLLAESW
KTTLATLGGF GLTILIGIPI AMVIAYSRLV ESYVYPLLVF SQSIPKVAIA PLFVVWFGFG
IFPKVISAFL LGFFPVVVST VMGFKSVEPD MLDLARSMGA SRLQTFFKIS LPQAMPAIFS
GLKVSVTLAV VGAVVGEFVG SNSGIGYVLQ VANGNFDLPL MFAALVVLSS IGVILFVAVD
IVERVMIPWH ASQRHAN
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