| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1841 |
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| Symbol | |
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| ID | 7970858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1974244 |
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| End bp | 1975428 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792442 |
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| Product | beta-ketothiolase |
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| Protein accession | YP_002943757 |
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| Protein GI | 239814847 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAC GCGACATCTT CGTGGTCGGC ACCGCCCGCA CTGCCATCGG CACCTTCGGC
GGCGCGCTGA AGGATGTGCC CAACACGCAA CTGGCCACCA CCGCCGTCAA GGCCGCCATC
GAACGCAGCG GCGTGGCGGC CGATGCCATC GGCCATGTGG TCATGGGCAA CGTGATTCCC
ACCGACGTGA AGGACGCCTA CCTGAGCCGC GTGGCCGCCA TCGATGCGGG CTGCCCGATC
GAGACGCCGG CCTTCAACGT CAACCGCCTC TGCGGCTCGG GCCTGCAGGC GATCGTGTCG
GCCGCGCAGG CCATTGCGCT GGGCGACTGC GACATCGCCA TCGGCGGCGG CTCGGAATCG
ATGAGCCGCG GGCCTTACTT CGACACATCC GCGCGCTACG GCGCACGCAT GGGCGATGCG
GTGCTGGTCG ACTACATGCT GGGCATCCTG CACGACCCGT GGGAGAAGAT CCACATGGGC
ATCACGGCCG AGAACGTGGC GGCGCGCTAC GGCATCACGC GCGAGCAGAT GGACGAGCTG
GCCGCCACCA GCCAGCAGCG CGCGGCGGCG GCCATTGCGG CGGGCCGCTT CAAGGCGCAG
ATCGTTCCGG TCGAGGTGAA GACGCGCAAG GGCGTCGTGC TGTTCGACAC CGACGAGCAT
GTGCGCGCCG ACACCACCGC CGAGACGCTC TCGAAGATGA AGCCCGCGTT CAAGAAGGAC
GGCCTCGTGA CGGCCGGCAA TGCCTCGGGC ATCAACGATG GTGCGGCCGC CGTGGTGCTG
GCCAGCGGCG AGAGCGTCAA GGCGCGGGGC CTGAGGCCGC TGGCGCGCCT GGTCGGCTAT
GCGCACGCCG GCGTGGAGCC CGCGTACATG GGCATCGGCC CGGTGCCGGC CACGCGCAAG
GTGCTGGAGC GCACCGGGCT GAAGGTCGCC GACTTCGACG TGATCGAGTC GAACGAGGCC
TTTGCGGCGC AGGCCTGCGC GGTCATCAAG GAACTGGGCT TCGATCCGGC CAAGGTCAAC
CCGAACGGCT CGGGCATTTC GCTGGGCCAC CCGGTGGGCG CGACCGGCGC GATCATCACC
ACGAAGGCGA TTGCCGAGCT GCACCGCACC GGCGGGCGTT ATGCGCTGGT CACGATGTGC
ATCGGCGGCG GGCAGGGCAT CGCCGCCGTG TTCGAACGCG TTTGA
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| Protein sequence | MTTRDIFVVG TARTAIGTFG GALKDVPNTQ LATTAVKAAI ERSGVAADAI GHVVMGNVIP
TDVKDAYLSR VAAIDAGCPI ETPAFNVNRL CGSGLQAIVS AAQAIALGDC DIAIGGGSES
MSRGPYFDTS ARYGARMGDA VLVDYMLGIL HDPWEKIHMG ITAENVAARY GITREQMDEL
AATSQQRAAA AIAAGRFKAQ IVPVEVKTRK GVVLFDTDEH VRADTTAETL SKMKPAFKKD
GLVTAGNASG INDGAAAVVL ASGESVKARG LRPLARLVGY AHAGVEPAYM GIGPVPATRK
VLERTGLKVA DFDVIESNEA FAAQACAVIK ELGFDPAKVN PNGSGISLGH PVGATGAIIT
TKAIAELHRT GGRYALVTMC IGGGQGIAAV FERV
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