| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1814 |
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| Symbol | |
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| ID | 7970831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1947960 |
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| End bp | 1949531 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792415 |
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| Product | alkyl hydroperoxide reductase, F subunit |
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| Protein accession | YP_002943730 |
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| Protein GI | 239814820 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.724768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGACG CCAGCACCAA AGCCCAATTG AAGAGTTACC TCGAACGCGC CACGCAGCCG
ATCGAGATCG TCGCCTCGCT CGACGACAGC AAGGCCTCGG GCGAAATGCT GTCGCTGCTG
AAGGACGTCG CCGAAGCGTC GCCGCTGGTC AAGCTGACCG AAAGCCGCGA CGACAACCAT
CGCAAGCCCT CTTTCTCGGT CAACCGTCCG AGCGAGAACC ACGGCCCGCG TTTTGCCGGC
CTGCCGATGG GCCATGAATT CACCTCGCTG ATCCTTGCAC TGCTGCAGAT CGGCGGCTAT
CCCCCGAAGG TCGAGCAGGC GGTGCTCGAC CAGATCCGCG CGCTCGACGG CGACTTCGAG
TTCGAGATCT ACGTTTCGCT CACCTGCCAC AACTGCCCCG ATGTGGTCCA GGCCCTGAAC
CTGATGGCCA TCCAGAACCC GCGCATCCGC ACCACCATGA TCGAGGGCGG CACCTTCCAG
GAAGAGGTCA AGGAACGCCA GGTGATGGCC GTGCCCACCG TGTTCCTGAA CGGCACCGAG
TTCGGCCAGG GCCGCATGAG CCTGGAAGAG ATCCTCGCGA AGATCGACAC CAGCGGTGTC
GAGCGCGAAG CGAAGAAGAT CGCCGCCAAG GACCCGTTCG ACGTGCTGAT CGTCGGCGGC
GGCCCGGCCG GCGCGGCGGC GGCCGTGTAT GCGGCGCGCA AGGGCATCCG CACCGGCGTG
GCCTCGGAGC GCTTTGGCGG CCAGGTGCTC GACACGCTGG GCATCGAGAA CTTCATCTCG
ATCAAGGAAA CCGAAGGACC GAAGTTCGCC CACGCCCTCG AAGAGCATGT GCGCGACTAC
GACGTCGACA TCATGAACCT GCAGCGCGCC AAGGCGCTGG TTCCGGGCAA GGACCTGATC
GAGGTGCAAC TGGAGAGCGG CGCTTCGCTC AAGAGCAAAT CGATCATCAT CTCGACCGGC
GCGCGCTGGC GCAACATCAA CGTGCCGGGC GAGCACGAGT TCAAGAACAA GGGCGTGGCC
TACTGCCCGC ACTGCGACGG CCCGCTGTTC AAGGGCAAGC GCGTGGCGGT GATCGGTGGC
GGCAATTCGG GCGTCGAAGC GGCCATCGAC CTGGCCGGCA TCGTCGGCCA TGTCACGCTG
ATCGAGTTCG ACACGCAGCT GCGCGCCGAC GCCGTGCTGC AGCGCAAGCT CAAGAGCCTG
AAGAACGTCG ACGTGTTCAC CAACGCGCAG ACCACCGAGA TCACCGGCGA CCAGAAGGTC
AACGGCCTGG TCTACAAGGA CCGCGCGACG GGCGAGCTGA AGAAGGTCGA ACTCGAAGGC
GTGTTCATCC AGATCGGCCT GGTGCCCAAC ACCGACTGGC TCAAGGGCGT GGTCGAGCTG
ACAAAGCACG GCGAGATCGT GGTCGACGCC AGGGGCCAGA CCTCGGTACC GGGCGTGTTT
GCCGCGGGCG ACGTGACGAC CGTGCCGTTC AAGCAGATCA TCATCGCGGC CGGCGACGGG
GCGAAGGCGG CGCTCGGCGC CTTCGATCAC CTGATCCGGA CCTCGGCCCC GGCCGAGCAG
GCGGCTCAGT AA
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| Protein sequence | MLDASTKAQL KSYLERATQP IEIVASLDDS KASGEMLSLL KDVAEASPLV KLTESRDDNH
RKPSFSVNRP SENHGPRFAG LPMGHEFTSL ILALLQIGGY PPKVEQAVLD QIRALDGDFE
FEIYVSLTCH NCPDVVQALN LMAIQNPRIR TTMIEGGTFQ EEVKERQVMA VPTVFLNGTE
FGQGRMSLEE ILAKIDTSGV EREAKKIAAK DPFDVLIVGG GPAGAAAAVY AARKGIRTGV
ASERFGGQVL DTLGIENFIS IKETEGPKFA HALEEHVRDY DVDIMNLQRA KALVPGKDLI
EVQLESGASL KSKSIIISTG ARWRNINVPG EHEFKNKGVA YCPHCDGPLF KGKRVAVIGG
GNSGVEAAID LAGIVGHVTL IEFDTQLRAD AVLQRKLKSL KNVDVFTNAQ TTEITGDQKV
NGLVYKDRAT GELKKVELEG VFIQIGLVPN TDWLKGVVEL TKHGEIVVDA RGQTSVPGVF
AAGDVTTVPF KQIIIAAGDG AKAALGAFDH LIRTSAPAEQ AAQ
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