| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1806 |
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| Symbol | |
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| ID | 7970823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1940537 |
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| End bp | 1941253 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644792407 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_002943722 |
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| Protein GI | 239814812 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.388089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCCC AATTCGGCTT GATGAACGTC TGGAACCAGG GCGATTTCGT CACCAAGGCC
GTCGCGCTGC TGTTGATCGG CATGTCGCTT GCGTCGTGGA TCGTGATCAT CATCAAGGCG
CTCGACGTCA TCAAATACAA GCGCCTTGCC AAGCATTCGC AGGACTTCTG GCATAGCGAA
GACTTCGCAA CCGCGCTCAA CAAGCTCGGC AAGGACGACA GCAACCCGTT CCGCGCCCTG
GCACTCGAAG GCCGCGAAGC GGCCGCGCAC CATCGCAACA CCAAAGCCCA CCTTCACGAT
GCACTGGACG TCAGCGACTG GATCACGCGC GCGCTGCGCA ACGGCATCGA TGCGTTCACC
GCGCGCCTTC AGACGGGCCT CGCCATCCTG GCGTCGGTCG GTTCGACGGC ACCGTTCATC
GGCCTGTTCG GCACCGTCTG GGGCATCTAC CACGCGCTCA TGAGCATCAG TACGGCCGGC
CAGGCCACCA TCGACAAGGT GGCGGGCCCG ATCGGCGAAG CACTGATCAT GACGGCGCTG
GGCCTTGCGG TGGCCATTCC GGCGGTGCTG GGCTACAACG CGCTGGTGCG CGGCAACAAG
TTTGTTCTCA CCAAGCTCAA CAGCTTCGCC CATGACCTGC ACGCCTACTT CGTGACGGGC
GCGCGCGTGC AAAGCGGTGG CGGCGACGCC ATCGTGGTTC CGCTCAAGAA GGGCTGA
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| Protein sequence | MDSQFGLMNV WNQGDFVTKA VALLLIGMSL ASWIVIIIKA LDVIKYKRLA KHSQDFWHSE
DFATALNKLG KDDSNPFRAL ALEGREAAAH HRNTKAHLHD ALDVSDWITR ALRNGIDAFT
ARLQTGLAIL ASVGSTAPFI GLFGTVWGIY HALMSISTAG QATIDKVAGP IGEALIMTAL
GLAVAIPAVL GYNALVRGNK FVLTKLNSFA HDLHAYFVTG ARVQSGGGDA IVVPLKKG
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