| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1802 |
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| Symbol | |
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| ID | 7970819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1938362 |
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| End bp | 1939063 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644792403 |
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| Product | protein of unknown function UPF0005 |
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| Protein accession | YP_002943718 |
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| Protein GI | 239814808 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.525736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACC GCGTTACCAC CCTCGACACT TCCGCCGGCT ACGGCCAGGC GCTGCCGCAG
GCTGAGCGCC AACGCGTCCT GCGCAATACC TACTGGCTGC TGGCGCTGAG CATGCTGCCC
ACCGTGCTGG GCGCCTGGAT CGGCGTTGCC ACCGGCATCA CAAGCTCGCT CACGGGCGGC
CTGGGCCTCA TGGTTTTCCT CGGCGGCGCC TTCGGCTTCA TGTTCGCCAT CGAGAAAACC
AAGAACTCGG CCGCCGGCGT GCCGGTGCTG CTGGGCTTCA CCTTCTTCAT GGGCCTGATG
CTGTCGCGGC TGATCGCGAT GGTGCTGGGT TTCAAGAACG GTTCCGAGCT CATCATGACG
GCGTTCGGCG GCACCGCCGG CGTTTTCTTC GTGATGGCAT CGCTGGCCAC GGTGATCAAG
CGCGACCTGT CCGGCATGGG CAAGTGGCTC TTCGTCGGCG CCATGGTGCT GATGGTGGGT
GCCATCATCA ACGTCTTCGT CGGCTCGAGC GCCGGCATGA TGGCCATCTC GGTGGCGGCC
ATCGGCATCT TCTCGGCCTT CATGCTCTAT GACCTGAAGC AGATCATGGA TGGCGGCGAA
ACCAACTACA TCAGCGCCAC GCTCGCGCTC TACCTTGACC TGTTCAACGT GTTCCAGAGC
CTGCTGGCCC TGCTGGGCAT CGCGGGCGGC GAACGCGACT GA
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| Protein sequence | MNDRVTTLDT SAGYGQALPQ AERQRVLRNT YWLLALSMLP TVLGAWIGVA TGITSSLTGG
LGLMVFLGGA FGFMFAIEKT KNSAAGVPVL LGFTFFMGLM LSRLIAMVLG FKNGSELIMT
AFGGTAGVFF VMASLATVIK RDLSGMGKWL FVGAMVLMVG AIINVFVGSS AGMMAISVAA
IGIFSAFMLY DLKQIMDGGE TNYISATLAL YLDLFNVFQS LLALLGIAGG ERD
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