Gene Vapar_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1789 
Symbol 
ID7970804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1926772 
End bp1927044 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content60% 
IMG OID644792388 
Producthistone family protein DNA-binding protein 
Protein accessionYP_002943705 
Protein GI239814795 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.970942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAAGA CCGAACTGAT TGAGCACATC GCAAAGAACG CCGATATTTC CAAGGCAGCC 
GCCACCCGCG CGCTGGAATC CACCATCGGC GCCATTCGTA CCACGCTCAA AAAAGGCGGC
TCGGTGTCGC TGGTCGGTTT CGGCACTTTC GCAGTCGGAA AAAGGGCCGC CCGCACCGGC
CGCAATCCGC GCACCGGCGA CGCGATTAAA ATCAAGGCCG CCAAGATTCC GAAGTTCCGT
CCGGGCAAGG CGTTGAAAGA CGCGCTGAAC TAA
 
Protein sequence
MNKTELIEHI AKNADISKAA ATRALESTIG AIRTTLKKGG SVSLVGFGTF AVGKRAARTG 
RNPRTGDAIK IKAAKIPKFR PGKALKDALN