| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1785 |
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| Symbol | |
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| ID | 7974527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1922624 |
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| End bp | 1923508 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792384 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_002943701 |
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| Protein GI | 239814791 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTGG CTGCGGCCCG CGGCGCAAGC TGGCTGCGCG CCATGCCGGC GGTGTTCGTG
CTGATCTGGA GCACGGGCTT CATCGTTGCG CGCTATGGCA TGCCCTATGC GCCGCCGCTC
AAGTTCCTGG CTGTGCGCTT TGCCCTTTCT CTCGTGTGCT TCTGCCTCTG GGTCAGGCTT
GCGCGGGTCG CCTGGCCGAA GGACCGCGCG CAGTGGGGGC ACCTGGCGGT CACCGGCGTC
CTGATGCAGG CGGGCTACCT GGGCGGCGTC TGGGCCGCGG TGCATGCGGG CATGGGTGCG
GGGCTGGTGG CATTGCTGGT CGGCATCCAG CCGGTGCTGA CCGCCGTCTG GCTGTCGTTC
AACGGCGGGC GCATTTCGCA GCGCCAATGG GCCGGGCTGG TGCTCGGCTT TGCGGGCCTG
GTGCTCGTGG TGTCGCGCAA GTTCGGCCAG GGCAGCGAGG TCAGCGCGTT GACCATGGCG
CTTGCGGTGA TGGCGCTCCT TTCGATCACG GCGGGCACGC TGTACCAGAA GCGCTTCGTC
GCCCCCTGCG ACGTGCGCAG CGCGAGCGCC GTGCAGATGG CAGCCGCATT GATCGTGTGC
CTGCCCTTTG CGGCCATGGA ATCGCAGGGC ATCGAATGGA ACGCGCATTC GACCGGCGCC
ATGGCCTGGT CGGTGCTGGT GCTGTCGCTG GGCGGCAGCT CGCTGCTCTA CATGCTGATC
CAGCGCGGCA CGGCCACCGC CGTCACGAGC CTGCTCTACC TGGTGCCGCC GTGCACGGCA
GTCATGGCCT GGCTGCTGTT CGCCGAGCCG ATCACCCTGG TGACCTTGCT GGGCATCGGC
CTCACCGCCG CCGGCGTGAG CCTGGTGGTG CGCAGCGATC GCTGA
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| Protein sequence | MSVAAARGAS WLRAMPAVFV LIWSTGFIVA RYGMPYAPPL KFLAVRFALS LVCFCLWVRL
ARVAWPKDRA QWGHLAVTGV LMQAGYLGGV WAAVHAGMGA GLVALLVGIQ PVLTAVWLSF
NGGRISQRQW AGLVLGFAGL VLVVSRKFGQ GSEVSALTMA LAVMALLSIT AGTLYQKRFV
APCDVRSASA VQMAAALIVC LPFAAMESQG IEWNAHSTGA MAWSVLVLSL GGSSLLYMLI
QRGTATAVTS LLYLVPPCTA VMAWLLFAEP ITLVTLLGIG LTAAGVSLVV RSDR
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