| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1779 |
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| Symbol | |
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| ID | 7974521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1914423 |
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| End bp | 1914977 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644792378 |
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| Product | elongation factor P |
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| Protein accession | YP_002943695 |
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| Protein GI | 239814785 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
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| TIGRFAM ID | [TIGR00038] translation elongation factor P |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATCG CTCAAGAAAT CCGCGCCGGC AACGTCATCA TGCACGGCAA GGACCCGATG
GTCGTCCTCA AGACCGAATA CAGCCGCGGC GGCCGCAACT CCGCCACCGT GCGCATGAAG
CTCAAGAGCC TGATCGCCAA CTTCAACACC GAAGTGGTCT TCAAGGCCGA CGACAAGATC
GACCAGATCG TGCTGGACAA GAAGGAGTGC ACCTACTCCT ACTTCGCCGA CCCGATGTAC
GTCTGCATGG ACACCGAGTA CAACCAGTAC GAAGTCGAAG CCGAGAACAT GGGCGACGCC
CTCAACTACC TCGAAGACGG CATGCCGGTC GAAGTGGTGT TCTACGACGG CAAGGCCATC
TCGGTCGAAC TGCCGACCAG CGTCGAGCGC GAAATCACCT GGACCGAGCC GGCCGTCAAG
GGCGACACCT CGGGCAAGGT GCTCAAGCCC GCCAAGATCG CCACCGGCTT CGAAGTGCCG
GTGCCGCTGT TCGTGTCGCA AGGCGACAAG ATCGAAATCG ACACCCGCAC CGGCGAATAC
CGCAAGCGCG TCTAA
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| Protein sequence | MKIAQEIRAG NVIMHGKDPM VVLKTEYSRG GRNSATVRMK LKSLIANFNT EVVFKADDKI
DQIVLDKKEC TYSYFADPMY VCMDTEYNQY EVEAENMGDA LNYLEDGMPV EVVFYDGKAI
SVELPTSVER EITWTEPAVK GDTSGKVLKP AKIATGFEVP VPLFVSQGDK IEIDTRTGEY
RKRV
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