| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1746 |
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| Symbol | |
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| ID | 7974488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1880554 |
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| End bp | 1881327 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644792345 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_002943662 |
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| Protein GI | 239814752 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCCG CAGCTGCATC ACCCGTCGAA CCCGCGGACG GCGGCGGCTC GCAGGCCGTG
AAGGCACAGC TGCGGCTGCG CGAGATGATC CTGGCCGGCG AGCTGCCCGG CGGTGCGCGC
ATTGCCGAGG TGGCCATCTC CGAGCAGCTC GGCGTCTCGC GCACGCCGGT GCGCAGCGCC
CTCATGCGGC TCGAACAGGA AGGCCTGCTC GAGGCGCTGC CCAACGGCGG CTATGCGGTG
CGCACTTTTT CCGAACGCGA CGTGGCCGAT GCGATCGAGC TGCGCGGCAC GCTCGAAGGC
CTGGTGGCGC GGCTCGCGGC CGAACGCGGC GCGGCGCCGG TGGTGCTGCG CGAGGCGCGC
GCCTGCCTGG CACGCATCGA CGAACTGCTG CGCGAGCCCG CGCTCGACGA CGCGGCCTTC
TCGCGGTACG TCACGCACAA CGAGAAGTTC CATTCGCTGC TGTGCGAGAT GGCGGCCAGC
CCGGTCATTG CGCAGCAGCT CGAACGCGTG GTCAACCTGC CGTTCGCGTC GCCCTCGGGC
TTTGTCATCG TGCAGGCCAA TTCGCCCGCG GCGCGCGACA TGCTCGTGAT CGCGCAGGAC
CAGCACCTGC AGGTGCTCGA TGCCATCGAG GCCGGCGAAG GCTCGCGTGC CGAGGCGCTG
ATGCGCGAGC ACAGCCGCAT CGCGCGGCGC AACCTGCGCG AGGCGCTGCA TGGCGCGACC
ACCGCCGAAC AGCGCCCGCT GCCCGGCGTG CAGCTGATCC GCCGCCGCGG CTGA
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| Protein sequence | MKAAAASPVE PADGGGSQAV KAQLRLREMI LAGELPGGAR IAEVAISEQL GVSRTPVRSA
LMRLEQEGLL EALPNGGYAV RTFSERDVAD AIELRGTLEG LVARLAAERG AAPVVLREAR
ACLARIDELL REPALDDAAF SRYVTHNEKF HSLLCEMAAS PVIAQQLERV VNLPFASPSG
FVIVQANSPA ARDMLVIAQD QHLQVLDAIE AGEGSRAEAL MREHSRIARR NLREALHGAT
TAEQRPLPGV QLIRRRG
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