| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1719 |
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| Symbol | |
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| ID | 7974461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1850239 |
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| End bp | 1851219 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792318 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943635 |
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| Protein GI | 239814725 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0711752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGAA GCAGATTCCT TGGCGGCCTC GCCACCCTTT CGGCTGCGGC CGCCCTGTCG
CTCGGGTTCG CCGCGACTGC CGCGGCGCAG GCCGGCGACT TTCCGAACCG CACGATCGAG
CTGCTGGTGC CCTACCAGCC GGGCGGCGGC ACCGACGGCC TGGCGCGCGC CTTCTCCGAG
GCCAGCCGCA AGCACATTTC GCAGAGCATC GTGATCGTCA ACCGTCCGGG CGCGGGCGGC
GCCATCGGCT GGACCGAGGT GATCAACGCC CGGCCCGACG GCTACAAGCT CGCGGTGCTC
ACGGTGGAAC TGCTGACGCT GCCGCACCTG GGCCTGGCCA AGTTCAACTA CGACGACTTC
CAGCCGATCG CGCAGCTCAA TGCCGACCCG GCCGCCATCA CCGTCAAGGC CGATGCGCCG
TGGAACACGA TCGAGGAATT CCTCGCGGCG GCGAAGAAGT CGCCCGAGAG CGTGCGCGTC
GGCAATTCGG GCAACGGTTC GATCTGGCAC CTGGCCGCCG CGGCGCTCGA GGACAAGACC
GGCGCCAGGT TCGGCCACAT CCCGTTCCAG GGTGCGGCGC CCGCGGTGCT GGCGCTGCTG
GGCGGGCACA TCGAGGCCGT GGCGGTGAGC CCGGCCGAGG TCACGACGCA TGTGCAGTCC
GGCAAGCTCA AGGTGCTGAT GGTCATGGCC GACAAGCGCG TGAAGGGCTT CGACAAGGTG
CCCACCGCCA AGGAGCGCGG CATCGACCTG TCGATCGGCA CCTGGCGCGG CCTCGGCGCC
CCCAAGAACA CGCCGCCCGA AGTGATGGCC AAGCTGCGCG AGATCACGGC CAAGACGGCC
GCCGAGCCGC TCATGCACGA GGTGATGGAC CGGCAGAACC TCGGCTACGT CTACACGGAC
GGCGCGGTGT TCAAGGAAAC CCTGGCCAAG GACAACGCCT ACTTCAAGGC GCTGATCGCC
AAACTGAACA TCAAGCCATG A
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| Protein sequence | MKRSRFLGGL ATLSAAAALS LGFAATAAAQ AGDFPNRTIE LLVPYQPGGG TDGLARAFSE
ASRKHISQSI VIVNRPGAGG AIGWTEVINA RPDGYKLAVL TVELLTLPHL GLAKFNYDDF
QPIAQLNADP AAITVKADAP WNTIEEFLAA AKKSPESVRV GNSGNGSIWH LAAAALEDKT
GARFGHIPFQ GAAPAVLALL GGHIEAVAVS PAEVTTHVQS GKLKVLMVMA DKRVKGFDKV
PTAKERGIDL SIGTWRGLGA PKNTPPEVMA KLREITAKTA AEPLMHEVMD RQNLGYVYTD
GAVFKETLAK DNAYFKALIA KLNIKP
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