Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1711 |
Symbol | |
ID | 7974453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1842024 |
End bp | 1843160 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644792310 |
Product | chaperone protein DnaJ |
Protein accession | YP_002943627 |
Protein GI | 239814717 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.926786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACAA AACGCGACTA CTACGAAACC CTCGGCGTTC CCAAGAACGC GAGCGAGGAG GAAATCAAGA AGGCTTATCG CAAGCTTGCG ATGAAGCACC ACCCGGACCG CAACCACGGC GATACCACCA AGGACGCCGA GACCAAGTTC AAGGAGGTCA AGGAAGCCTA CGAAATGCTG TCTGACGCGC AGAAGCGCGC GGCCTACGAC CAGTACGGCC ACGCCGGCGT CGACCCCAAC ATGCGCGGCG GCCCCGGTGC CGAAGGCTTC GGCGGCTTTG CGGAGGCCTT TGGCGACATC TTCGGCGACG TGTTCGGCGG CGCGCGCGGG CGCACCAGCG GCGGGCGCCA GGTGTTCCGC GGCAGCGACC TGAGCTATGC GATGGAGGTC ACGCTGGAAG AAGCGGCCGA GGGCAAGGAA GCGCAGATCC GCATCCCGAG CTGGGACGAC TGCGGCACCT GCAAGGGCAC CGGCGCCAAG CCTGGCACCA AGCCCATCAC CTGCACCACC TGCCACGGCG CCGGCGCCGT GCAGATGCGC CAAGGCTTCT TCAGCGTGCA GCAGACCTGC CCGACCTGCC ACGGCAGCGG CAAGATCATT CCCGAGCCCT GCACCGTGTG CCATGGCCAG GGCAAGATCA AGAACAACAA GACGCTCGAG GTCAAGATCC CGGCCGGCAT CGACGACGGC ATGCGCATCC GCAGCACCGG CAACGGCGAA CCGGGCACCA ACGGCGGGCC GCCGGGCGAC CTGTATATCG AGATCCGGCT CAAGAAGCAC GAGCTGTTCG AGCGCGATGG CGACGACCTG CACTGCGTCG TGCCCGTGAG CATGACCACC GCGGCGCTGG GCGGCGAGAT CAGCGTGCCC ACGCTCAAGG GCGCCGCCGC CATCGACATT CCCGATGGCA CCCAGAGCGG CAAGCAGTTC CGCCTGCGCG GCAAGGGCAT CAAGGGCGTG CGCTCCAGCT ATCCGGGCGA CCTGTACTGC CACGTGCGCG TCGAAACGCC GGTCAAGCTC ACCGAGCACC AGCGCAAGCT GCTCAAGGAG CTGGACGAAT CGCTCAAGAA GGGCGGCGAC AAGCACAGCC CGACCGACAA GGGCTGGTTC GACAAGGCCA AGGAATTCTT CAGCTGA
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Protein sequence | MATKRDYYET LGVPKNASEE EIKKAYRKLA MKHHPDRNHG DTTKDAETKF KEVKEAYEML SDAQKRAAYD QYGHAGVDPN MRGGPGAEGF GGFAEAFGDI FGDVFGGARG RTSGGRQVFR GSDLSYAMEV TLEEAAEGKE AQIRIPSWDD CGTCKGTGAK PGTKPITCTT CHGAGAVQMR QGFFSVQQTC PTCHGSGKII PEPCTVCHGQ GKIKNNKTLE VKIPAGIDDG MRIRSTGNGE PGTNGGPPGD LYIEIRLKKH ELFERDGDDL HCVVPVSMTT AALGGEISVP TLKGAAAIDI PDGTQSGKQF RLRGKGIKGV RSSYPGDLYC HVRVETPVKL TEHQRKLLKE LDESLKKGGD KHSPTDKGWF DKAKEFFS
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